| Literature DB >> 32749464 |
Yoshito Koyanagi1,1,1,1, Shinji Ueno1, Yasuki Ito1, Taro Kominami1, Shiori Komori1, Masato Akiyama1,1,1,2, Yusuke Murakami1, Yasuhiro Ikeda1,1, Koh-Hei Sonoda1, Hiroko Terasaki1.
Abstract
Purpose: To determine the relationship between the macular curvature and the causative genes of retinitis pigmentosa (RP).Entities:
Mesh:
Substances:
Year: 2020 PMID: 32749464 PMCID: PMC7441377 DOI: 10.1167/iovs.61.10.6
Source DB: PubMed Journal: Invest Ophthalmol Vis Sci ISSN: 0146-0404 Impact factor: 4.799
Figure 1.Fundus photographs and SD-OCT images of representative cases with RP for each causative gene. A: Case 1 is a 50-year-old female that was a case with EYS-related retinitis pigmentosa (RP) with an ellipsoid zone (EZ) of 635 µm. The mean macular curvature index (MMCI) was −0.3 × 10−5 µm−1. The axial length (AL) was 24.81 mm. B: Case 2 is a 48-year-old female with EYS-related RP with an EZ of 2762 µm. Bruch's membrane has a steeper curvature than that of Case 1. The MMCI was −36.0 × 10−5 µm−1. The AL was 24.52 mm. C: Case 3 is a 53-year-old male with USH2A-related RP and an EZ of 3266 µm. The MMCI was −8.0 × 10−5 µm−1. The AL was 23.81 mm. D: Case 4 is a 34-year-old male who is a case of RPGR-related RP with an EZ of 2333 µm. The OCT image shows a steep macular curvature. The MMCI was −47.8 × 10−5 µm−1. The AL was 25.83 mm. E: Case 5 is a 23-year-old female who is a case of RP1-related RP without an intact EZ (0 µm). This case had a relatively flat macular line. The MMCI was −5.62 × 10−5 µm−1. The AL was 21.81 mm. F: Case 6 is a 67-year-old male who is a case of RP1L1-related RP without an intact EZ (0 µm). The MMCI was −18.01 × 10−5 µm−1. The AL was 24.09 mm.
Genetic Diagnosis of Patients With RP
| ID | Age, y | Gender | Causative Genes | Genetic Inheritance Form | Variant 1 | Zygosity 1 | Variant 2 | Zygosity 2 |
|---|---|---|---|---|---|---|---|---|
| N-27 | 27 | F |
| AR | p.(Ser1653fs) | Homo | — | — |
| N-38 | 54 | M |
| AR | p.(Ser1653fs) | Hetero | p.(Tyr2935*) | Hetero |
| N-122 | 49 | M |
| XL | p.(G1u746fs) | Hemi | — | — |
| N-71 | 44 | F |
| AR | p.(Ser1653fs) | Homo | — | — |
| N-109 | 59 | M |
| AR | p.(Ser4748Phe) | Hetero | p.(Cys934Trp) | Hetero |
| N-167 | 34 | F |
| AR | p.(Ser1653fs) | Homo | — | — |
| N-168 | 29 | M |
| AR | p.(Thr3667Pro) | Hetero | p.(Val164Phe) | Hetero |
| N-169 | 51 | F |
| AR | p.(AIa2736Pro) | Hetero | p.(GIn203*) | Hetero |
| N-180 | 61 | F |
| AR | p.(Ser1653fs) | Hetero | p.(Gly2186G1u) | Hetero |
| N-183 | 70 | F |
| AR | p.(Tyr2935*) | Hetero | p.(Asn404fs) | Hetero |
| N-208 | 48 | F |
| AR | p.(Ser5060Pro) | Hetero | p.(Ser4748Phe) | Hetero |
| N-224 | 39 | M |
| AR | p.(Tyr2555fs) | Hetero | p.(Cys211Tyr) | Hetero |
| N-225 | 37 | M |
| XL | p.(G1u746fs) | Hemi | — | — |
| N-250 | 71 | M |
| AD | p.(G1u661*) | Hetero | — | — |
| N-257 | 48 | F |
| AR | p.(Ser1653fs) | Hetero | p.(AIa2498Pro) | Hetero |
| N-259 | 46 | F |
| AR | p.(Gly2186G1u) | Homo | — | — |
| N-303 | 60 | F |
| AR | p.(Asp498fs) | Hetero | p.(Cys211Tyr) | Hetero |
| N-37 | 57 | F |
| AR | p.(Gly2799fs) | Hetero | p.(Arg1870Trp) | Hetero |
| N-39 | 31 | F |
| AR | p.(Tyr1352Alafs*9) | Homo | — | — |
| NA0048 | 19 | F |
| AR | p.(Tyr1352Alafs*9) | Homo | — | — |
| NA0070 | 38 | F |
| AR | p.(Tyr1352Alafs*9) | Homo | — | — |
| N-34 | 47 | M |
| AR | p.(Tyr2935*) | Hetero | p.(Gly2186G1u) | Hetero |
| N-75 | 64 | F |
| AR | p.(Cys934Trp) | Hetero | p.(G1n4371fs) | Hetero |
| NA0209 | 19 | M |
| AR | p.(Tyr1352Alafs*9) | Hetero | p.(Cys1399Leufs*5) | Hetero |
| N-228 | 77 | F |
| AR | p.(Gy2186G1u) | Hetero | p.(Tyr2935*) | Hetero |
| N-233 | 47 | M |
| XL | p.(G1u802fs) | Hemi | — | — |
| N-294 | 43 | M |
| AR | p.(Cys934Trp) | Homo | — | — |
| N-298 | 22 | M |
| XL | p.(Thr575fs) | Hemi | — | — |
| NA1048 | 23 | M |
| AR | p.(Tyr1352Alafs*9) | Homo | — | — |
| N-1201 | 36 | F |
| AR | p.(Tyr1352Alafs*9) | Hetero | p.(Cys1399Leufs*5) | Hetero |
| NAl209 | 29 | F |
| AR | p.(Tyr1352Alafs*9) | Hetero | p.(Cys1399Leufs*5) | Hetero |
| OPH-783 | 35 | M |
| XL | p.? | Hemi | — | — |
| OPH-209 | 49 | M |
| AR | p.(Ser1653fs) | Hetero | p.(Trp2640*) | Hetero |
| OPH-499 | 64 | F |
| AR | p.(Ser1653fs) | Homo | — | — |
| OPH-39 | 69 | M |
| XL | p.(Gly718fs) | Hemi | — | — |
| OPH-753 | 48 | F |
| AR | p.(Cys934Trp) | Hetero | p.(G1u1985Lys) | Hetero |
| OPH-423 | 48 | F |
| AR | p.(Ser1653fs) | Homo | — | — |
| OPH-985 | 42 | M |
| AR | p.(Tyr2935*) | Hetero | p.(Gly2186G1u) | Hetero |
| OPH-616 | 43 | M |
| AR | p.(Ser1653fs) | Homo | — | — |
| OPH-183 | 68 | F |
| AR | p.(Arg658*) | Hetero | p.(G1u501*) | Hetero |
| OPH-302 | 54 | M |
| AR | p.(Arg1870Trp) | Hetero | p.(Gly2752Arg) | Hetero |
| OPH-570 | 54 | M |
| AR | p.(Pro5078Arg) | Hetero | p.(GIy2752Arg) | Hetero |
| OPH-908 | 40 | M |
| AR | p.(Ser1653fs) | Homo | — | — |
| OPH-458 | 29 | F |
| AD | p.(Arg872fs) | Hetero | — | — |
| OPH-698 | 53 | F |
| AR | p.(Ser1653fs) | Homo | — | — |
| OPH-16 | 44 | M |
| AR | p.(Gly268Arg) | Homo | — | — |
| OPH-182 | 23 | F |
| AR | p.(Cys1399fs) | Homo | p.(Ser2118Asn) | Homo |
| OPH-980 | 53 | M |
| AR | p.(Ser1653fs) | Homo | — | — |
| OPH-613 | 47 | M |
| AR | p.(Tyr2935*) | Homo | — | — |
| OPH-159 | 58 | M |
| AD | p.(Arg872fs) | Hetero | — | — |
| OPH-767 | 51 | M |
| AR | p.(Cys211Tyr) | Homo | p.(Leu2938Met) | Hetero |
| OPH-43 | 52 | F |
| AR | p.(Pro560Ala) | Homo | p.(Gly2752Arg) | Homo |
| OPH-552 | 46 | F |
| AR | p.(Gln3101fs) | Homo | — | — |
| OPH-129 | 68 | M |
| AR | p.(Ala1009fs) | Homo | — | — |
| OPH-824 | 53 | F |
| AR | p.(Tyr2935*) | Homo | — | — |
| OPH-864 | 50 | F |
| AR | p.(Tyr2935*) | Homo | — | — |
| OPH-459 | 36 | F |
| AR | p.(Tyr3701*) | Hetero | p.(lle3620Thr) | Hetero |
| OPH-465 | 66 | M |
| AR | p.(Arg658*) | Homo | — | — |
| OPH-293 | 59 | F |
| AR | p.(Ser1653fs) | Hetero | p.(Met12Thr) | Hetero |
| OPH-279 | 50 | F |
| AR | p.(Ser1653fs) | Homo | — | — |
| OPH-327 | 52 | M |
| AR | p.(Arg658*) | Homo | — | — |
| OPH-791 | 42 | M |
| AD | p.(GIn689*) | Hetero | — | — |
| OPH-222 | 78 | M |
| AD | p.(Arg872fs) | Hetero | — | — |
| OPH-617 | 50 | F |
| AR | p.(Ser1653fs) | Homo | — | — |
| OPH-51 | 43 | F |
| AR | p.(Tyr2935*) | Hetero | p.(Ser69fs) | Hetero |
The noncanonical splice site variant (c.28+5G>A) in RPGR was detected in OPH-783. NA0209 & NA1209 and NA0048 & NA1048 were siblings. AD, autosomal dominant; AR, autosomal recessive; Hetero, heterozygous; Hemi, hemizygous; Homo, homozygous; XL, X-linked.
Characteristics of RP Cases Among Causative Genes
| Parameter |
|
|
|
|
|
|
|---|---|---|---|---|---|---|
| Age, y | 50.16 ± 10.00 | 48.28 ± 9.86 | 43.18 ± 15.95 | 38.18 ± 19.43 | 63.51 ± 7.44 | 0.01 |
| AL, mm | 24.18 ± 1.00 | 24.34 ± 1.14 | 24.85 ± 1.82 | 23.46 ± 1.47 | 23.84 ± 1.00 | 0.19 |
| BCVA, logMAR | 0.38 ± 0.56 | 0.25 ± 0.31 | 0.71 ± 0.71 | 0.79 ± 0.81 | 0.56 ± 0.78 | 0.34 |
| EZ width, µm | 1465.7 ± 1419.7 | 1393.00 ± 965.61 | 1090.8 ± 1305.02 | 1244.00 ± 1797.80 | 2234.00 ± 2410.23 | 0.68 |
| MMCI, × 10−5, µm−1 | −15.54 ± 13.63 | −10.35 ± 3.92 | −35.81 ± 11.73 | −14.71 ± 10.76 | −13.84 ± 6.39 | 0.02 |
Values are presented as mean ± SD (standard deviation).
*Statistical significance by Kruskal-Wallis test.
Figure 2.Distribution of MMCIs of RP eyes among causative genes, EYS, USH2A, RPGR, RP1, and RP1L1 is shown. The box length represents the interquartile range, and the middle line depicts the median. MMCI, the mean macular curvature index; RP, retinitis pigmentosa.
Results of Multiple Linear Regression Analysis for Independence of Causative Genes Contributing to MMCIs
| RP Cases ( | |||
|---|---|---|---|
| Gene | Estimate | Standard Error |
|
|
| 3.92 × 10−5 | 3.47 × 10−5 | 0.26 |
|
| −2.42 × 10−4 | 4.80 × 10−5 | 5.30 × 10−6 |
|
| −2.50 × 10−5 | 3.60 × 10−5 | 0.49 |
|
| 5.57 × 10−6 | 5.50 × 10−5 | 0.92 |
Results of multiple linear regression analysis for independence of causative genes contributing to the MMCIs. To adjust for the clinical factors, we included the sex (male or female), age (years, continuous), EZ width (µm, continuous), and AL (mm, continuous) as covariates in the analysis. The effect of the EYS gene on MMCI was defined as a reference. We quantified the effects of other genes. The MMCI values were converted to absolute square numbers to treat them as normal distributions.