Literature DB >> 32747756

Knotting a molecular strand can invert macroscopic effects of chirality.

Nathalie Katsonis1,2, Federico Lancia3,4, David A Leigh5,6, Lucian Pirvu7, Alexander Ryabchun3,4, Fredrik Schaufelberger7.   

Abstract

Transferring structural information from the nanoscale to the macroscale is a promising strategy for developing adaptive and dynamic materials. Here we demonstrate that the knotting and unknotting of a molecular strand can be used to control, and even invert, the handedness of a helical organization within a liquid crystal. An oligodentate tris(2,6-pyridinedicarboxamide) strand with six point-chiral centres folds into an overhand knot of single handedness upon coordination to lanthanide ions, both in isotropic solutions and in liquid crystals. In achiral liquid crystals, dopant knotted and unknotted strands induce supramolecular helical organizations of opposite handedness, with dynamic switching achievable through in situ knotting and unknotting events. Tying the molecular knot transmits information regarding asymmetry across length scales, from Euclidean point chirality (constitutional chirality) via molecular entanglement (conformation) to liquid-crystal (centimetre-scale) chirality. The magnitude of the effect induced by the tying of the molecular knots is similar to that famously used to rotate a glass rod on the surface of a liquid crystal by synthetic molecular motors.

Entities:  

Year:  2020        PMID: 32747756     DOI: 10.1038/s41557-020-0517-1

Source DB:  PubMed          Journal:  Nat Chem        ISSN: 1755-4330            Impact factor:   24.427


  42 in total

1.  Stretching Response of Knotted and Unknotted Polymer Chains.

Authors:  Michele Caraglio; Cristian Micheletti; Enzo Orlandini
Journal:  Phys Rev Lett       Date:  2015-10-27       Impact factor: 9.161

Review 2.  Molecular knots in biology and chemistry.

Authors:  Nicole C H Lim; Sophie E Jackson
Journal:  J Phys Condens Matter       Date:  2015-08-20       Impact factor: 2.333

3.  Statistical mechanics and topology of polymer chains.

Authors:  M D Frank-Kamenetskii; A V Lukashin; A V Vologodskii
Journal:  Nature       Date:  1975-12-04       Impact factor: 49.962

4.  Stabilizing effect of knots on proteins.

Authors:  Joanna I Sułkowska; Piotr Sulkowski; P Szymczak; Marek Cieplak
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-08       Impact factor: 11.205

5.  Chemical topology: complex molecular knots, links, and entanglements.

Authors:  Ross S Forgan; Jean-Pierre Sauvage; J Fraser Stoddart
Journal:  Chem Rev       Date:  2011-06-21       Impact factor: 60.622

Review 6.  How to fold intricately: using theory and experiments to unravel the properties of knotted proteins.

Authors:  Sophie E Jackson; Antonio Suma; Cristian Micheletti
Journal:  Curr Opin Struct Biol       Date:  2016-10-26       Impact factor: 6.809

Review 7.  Biochemical topology: applications to DNA recombination and replication.

Authors:  S A Wasserman; N R Cozzarelli
Journal:  Science       Date:  1986-05-23       Impact factor: 47.728

8.  Influence of a knot on the strength of a polymer strand.

Authors:  A M Saitta; P D Soper; E Wasserman; M L Klein
Journal:  Nature       Date:  1999-05-06       Impact factor: 49.962

9.  Photoswitchable gel assembly based on molecular recognition.

Authors:  Hiroyasu Yamaguchi; Yuichiro Kobayashi; Ryosuke Kobayashi; Yoshinori Takashima; Akihito Hashidzume; Akira Harada
Journal:  Nat Commun       Date:  2012-01-03       Impact factor: 14.919

10.  A nanofluidic knot factory based on compression of single DNA in nanochannels.

Authors:  Susan Amin; Ahmed Khorshid; Lili Zeng; Philip Zimny; Walter Reisner
Journal:  Nat Commun       Date:  2018-04-17       Impact factor: 14.919

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  4 in total

1.  A molecular endless (74) knot.

Authors:  David A Leigh; Jonathan J Danon; Stephen D P Fielden; Jean-François Lemonnier; George F S Whitehead; Steffen L Woltering
Journal:  Nat Chem       Date:  2020-12-14       Impact factor: 24.427

Review 2.  Knotting matters: orderly molecular entanglements.

Authors:  Zoe Ashbridge; Stephen D P Fielden; David A Leigh; Lucian Pirvu; Fredrik Schaufelberger; Liang Zhang
Journal:  Chem Soc Rev       Date:  2022-09-20       Impact factor: 60.615

3.  Social Self-Sorting Synthesis of Molecular Knots.

Authors:  Zoe Ashbridge; Olivia M Knapp; Elisabeth Kreidt; David A Leigh; Lucian Pirvu; Fredrik Schaufelberger
Journal:  J Am Chem Soc       Date:  2022-09-06       Impact factor: 16.383

4.  Effects of turn-structure on folding and entanglement in artificial molecular overhand knots.

Authors:  Yiwei Song; Fredrik Schaufelberger; Zoe Ashbridge; Lucian Pirvu; Iñigo J Vitorica-Yrezabal; David A Leigh
Journal:  Chem Sci       Date:  2020-12-08       Impact factor: 9.825

  4 in total

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