| Literature DB >> 32747185 |
Samira Fafi-Kremer1, Timothée Bruel2, Yoann Madec3, Rebecca Grant3, Laura Tondeur3, Ludivine Grzelak4, Isabelle Staropoli5, François Anna6, Philippe Souque7, Sandrine Fernandes-Pellerin8, Nathalie Jolly8, Charlotte Renaudat9, Marie-Noëlle Ungeheuer9, Catherine Schmidt-Mutter10, Nicolas Collongues11, Alexandre Bolle10, Aurélie Velay12, Nicolas Lefebvre13, Marie Mielcarek14, Nicolas Meyer15, David Rey16, Pierre Charneau17, Bruno Hoen18, Jérôme De Seze11, Olivier Schwartz5, Arnaud Fontanet19.
Abstract
BACKGROUND: The serologic response of individuals with mild forms of SARS-CoV-2 infection is poorly characterized.Entities:
Keywords: Antibodies; Mild covid-19; Neutralization; Serology; sars-cov-2
Mesh:
Substances:
Year: 2020 PMID: 32747185 PMCID: PMC7502660 DOI: 10.1016/j.ebiom.2020.102915
Source DB: PubMed Journal: EBioMedicine ISSN: 2352-3964 Impact factor: 8.143
Fig. 1Analysis of SARS-Cov-2 antibody response. (A) Sera from the 160 HCW were surveyed for anti-SARS-Cov-2 antibodies. S- Flow data are represented by the frequency of S+ cells (n = 160, left panel) and the median Fluorescence intensity (MFI) in positive samples (n = 159, middle panel). Historical pre-epidemic samples (pre) were included to determine backgrounds of S Flow (n = 140). Each dot represents a sample. Samples were grouped according to the number of days after symptom onset. Statistical analyses were performed using Kruskall-Wallis with Dunn's multiple comparisons test. * p < 0.005. n.a.: not applicable (B) Neutralizing activity of the 160 sera. The ability of each serum to neutralize lentiviral S- pseudotypes was assessed at a serum dilution of 1:100. Samples are grouped according to the number of days after symptom onset (left panel); * p < 0.005 using Kruskall-Wallis with Dunn's multiple comparisons test. For each time group, the frequencies of samples displaying a ID50 >100 (middle panel) or a ID80 >100 (right panel) were determined. Each dot represents a sample.; p-values obtained using the Chi-square test. (C) Relationship between serological measurement and neutralizing activity. The S-Flow MFI of samples displaying ID50 and ID80 above or below 100 are depicted. Each dot represents a sample. **** p < 0.0001 Unpaired t-test. The statistically significant differences are depicted.
Characteristics of the 160 hospital staff with PCR-confirmed SARS-CoV-2 infection.
| Characteristic | N (%) |
|---|---|
| Male | 50 (31.2) |
| Age (years), median (IQR) | 32 (26–44) |
| Age group (years) | |
| ≤29 | 66 (41.3) |
| 30–39 | 40 (25.0) |
| 40–49 | 26 (16.2) |
| ≥50 | 28 (17.5) |
| Occupation | |
| Physician | 32 (20.0) |
| Nurse | 31 (19.4) |
| Medical student | 45 (28.1) |
| Orderly | 17 (10.6) |
| Hospital assistant | 4 (2.5) |
| Administrative staff | 17 (10.6) |
| Other | 14 (8.8) |
| Contact with COVID-19 patients | |
| No | 80 (50.0) |
| Yes | 74 (46.3) |
| Missing | 6 (3.7) |
| Level of potential exposure to COVID-19 patients | |
| None | 10 (13.5) |
| Some exposure | 27 (36.5) |
| High exposure | 37 (50.0) |
| Types of care activities | |
| Mouth care | 15 (40.5) |
| Intubation | 13 (35.1) |
| Other contact with tracheo-bronchial sputum | 16 (43.2) |
| Nasopharyngeal smear | 7 (18.9) |
| Other | 10 (27.0) |
| Symptoms | |
| Minor only | 5 (3.1) |
| Major (cough, fever, dyspnea, anosmia and ageusia) | 155 (96.9) |
| Number of major symptoms | |
| 0 | 5 (3.1) |
| 1 | 41 (25.6) |
| 2 | 33 (20.6) |
| 3 | 35 (21.9) |
| 4 | 32 (20.0) |
| 5 | 14 (8.8) |
| Reported symptoms | |
| Ageusia | 89 (55.6) |
| Anosmia | 76 (47.5) |
| Asthenia | 137 (85.6) |
| Dry cough | 93 (58.1) |
| Diarrhea | 44 (27.5) |
| Dyspnoea | 55 (34.4) |
| Fever | 97 (60.6) |
| Fever, feeling of | 53 (33.1) |
| Headache | 120 (75.0) |
| Chest pain | 46 (28.7) |
| Abdominal pain | 27 (16.9) |
| Myalgia | 112 (70.0) |
| Nasal obstruction | 57 (35.6) |
| Nausea | 21 (13.1) |
| Pharyngitis | 44 (27.5) |
| Rhinitis | 70 (43.7) |
| Shivers | 45 (28.1) |
| Sweats | 55 (34.4) |
| Vomiting | 3 (1.9) |
| Other | 29 (18.1) |
| Time between onset of symptoms and positive PCR test result (days), median (IQR) | 2 (1–4) |
| Time from onset of symptoms to blood sample collection (days), median (IQR) | 24 (21–28) |
| Time from onset of symptoms to blood sample collection (days) | |
| 7–13 | 1 (0.6) |
| 14–20 | 28 (17.5) |
| 21–27 | 83 (51.9) |
| ≥ 28 | 48 (30.0) |
based on 75 participants who reported having contact with COVID-19 patients.
based on the 37 participants who reported having a care activity with high exposure.
Seropositivity with the different assays (Rapid test, S-Flow, and pseudoneutralization) according to the time after onset of symptoms.
| Time from onset of symptoms (days) | 13–20 ( | 21–27 ( | ≥28 ( | Total | |
|---|---|---|---|---|---|
| Rapid test IgM | 26 (89.7) | 75 (90.4) | 40 (83.3) | 141 (88.1) | 0.47 |
| Rapid test IgG | 14 (48.3) | 59 (71.1) | 41 (85.4) | 114 (71.2) | 0.002 |
| Rapid test IgG or IgM | 27 (93.1) | 80 (96.4) | 46 (95.8) | 153 (95.6) | 0.76 |
| S-Flow | 28 (96.5) | 83 (100) | 48 (100) | 159 (99.4) | 0.18 |
| Pseudoneutralization ID50 >100 | 23 (79.3) | 76 (91.6) | 47 (97.9) | 146 (91.2) | 0.020 |
| Pseudoneutralization ID80 >100 | 11 (37.9) | 44 (53.0) | 37 (77.1) | 92 (57.5) | 0.002 |
Proportion of 160 participants with protective immunity according to time since onset of symptoms, type of symptoms, age, underlying medical conditions and tobacco use.
| N | Neutralization ID50 > 100 | P value (Chi-square test) | Neutralization ID80 > 100 | P value (Chi-square test) | |
|---|---|---|---|---|---|
| Time between onset of symptoms and collection of blood sample (days) | 0.02 | 0.004 | |||
| 13–20 | 29 | 23 (79.3) | 11 (37.9) | ||
| 21–27 | 83 | 76 (91.6) | 44 (53.0) | ||
| ≥28 | 48 | 47 (97.9) | 37 (77.0) | ||
| Number of participants with major symptoms | 0.87 | 0.44 | |||
| 0 | 5 | 4 (80.0) | 3 (60.0) | ||
| 1 | 41 | 38 (92.7) | 29 (70.7) | ||
| 2 | 33 | 30 (90.9) | 16 (48.5) | ||
| 3 | 35 | 35 (94.3) | 20 (57.1) | ||
| 4 | 32 | 33 (94.3) | 16 (50.0) | ||
| 5 | 14 | 12 (85.7) | 8 (57.1) | ||
| Ageusia | 0.85 | 0.39 | |||
| No | 84 | 77 (91.7) | 51 (60.7) | ||
| Yes | 76 | 69 (90.8) | 41(53.9) | ||
| Anosmia | 0.21 | 0.48 | |||
| No | 71 | 67 (94.4) | 43 (60.6) | ||
| Yes | 89 | 79 (88.8) | 49 (55.1) | ||
| Dry cough | 0.22 | 0.04 | |||
| No | 67 | 59 (88.1) | 45 (67.2) | ||
| Yes | 93 | 87 (93.5) | 47 (50.5) | ||
| Fever | 0.15 | 0.29 | |||
| No | 63 | 55 (87.3) | 33 (52.4) | ||
| Yes | 97 | 91 (93.8) | 59 (60.8) | ||
| Gender | 0.41 | 0.07 | |||
| Male | 50 | 47 (94.0) | 34 (68.0) | ||
| Female | 110 | 99 (90.0) | 58 (52.7) | ||
| Age group | 0.92 | 0.17 | |||
| ≤29 | 66 | 59 (89.4) | 33 (50.0) | ||
| 30–39 | 40 | 37 (92.5) | 23 (57.5) | ||
| 40–49 | 26 | 24 (92.3) | 15 (57.7) | ||
| ≥50 | 28 | 26 (92.9) | 21 (75.0) | ||
| BMI | 0.22 | 0.02 | |||
| <18.5 | 10 | 7 (70.0) | 3 (30.0) | ||
| 18.5–25 | 105 | 97 (92.4) | 55 (52.4) | ||
| 25–30 | 27 | 25 (92.6) | 19 (70.4) | ||
| ≥30 | 17 | 16 (94.1) | 14 (82.4) | ||
| Missing | 1 | 1 (100) | 1 (100) | ||
| Arterial hypertension | 0.31 | 0.03 | |||
| No | 150 | 136 (90.7) | 83 (55.3) | ||
| Yes | 10 | 10 (100) | 9 (90.0) | ||
| Asthma | 0.02 | 0.67 | |||
| No | 149 | 138 (92.6) | 85 (57.1) | ||
| Yes | 11 | 8 (72.7) | 7 (63.6) | ||
| Flu vaccine | 0.02 | 0.46 | |||
| No | 104 | 99 (95.2) | 62 (59.6) | ||
| Yes | 56 | 47 (83.9) | 30 (53.6) | ||
| Blood group | 0.26 | 0.96 | |||
| A | 55 | 50 (90.9) | 31 (56.4) | ||
| B | 18 | 18 (100) | 9 (50) | ||
| AB | 3 | 2 (66.7) | 2 (66.7) | ||
| O | 50 | 44 (88.0) | 30 (60.0) | ||
| Not specified | 34 | 32 (94.1) | 20 (58.8) | ||
| Tobacco use | 0.57 | 0.97 | |||
| No | 141 | 128 (90.8) | 81 (57.5) | ||
| Yes | 19 | 18 (94.7) | 11 (57.9) | ||
| Exposure to patients | 0.32 | 0.49 | |||
| None | 96 | 85 (88.5) | 52 (54.2) | ||
| Low | 27 | 26 (96.3) | 18 (66.7) | ||
| High | 37 | 35 (94.6) | 22 (59.5) | ||