Literature DB >> 32746458

The Digital MIQE Guidelines Update: Minimum Information for Publication of Quantitative Digital PCR Experiments for 2020.

Jim F Huggett.   

Abstract

Digital PCR (dPCR) has developed considerably since the publication of the Minimum Information for Publication of Digital PCR Experiments (dMIQE) guidelines in 2013, with advances in instrumentation, software, applications, and our understanding of its technological potential. Yet these developments also have associated challenges; data analysis steps, including threshold setting, can be difficult and preanalytical steps required to purify, concentrate, and modify nucleic acids can lead to measurement error. To assist independent corroboration of conclusions, comprehensive disclosure of all relevant experimental details is required. To support the community and reflect the growing use of dPCR, we present an update to dMIQE, dMIQE2020, including a simplified dMIQE table format to assist researchers in providing key experimental information and understanding of the associated experimental process. Adoption of dMIQE2020 by the scientific community will assist in standardizing experimental protocols, maximize efficient utilization of resources, and further enhance the impact of this powerful technology. © American Association for Clinical Chemistry 2020.

Keywords:  MIQE; dMIQE; dPCR; digital PCR

Mesh:

Substances:

Year:  2020        PMID: 32746458     DOI: 10.1093/clinchem/hvaa125

Source DB:  PubMed          Journal:  Clin Chem        ISSN: 0009-9147            Impact factor:   8.327


  56 in total

1.  Effects of colchicine on tissue factor in oxLDL-activated T-lymphocytes.

Authors:  Plinio Cirillo; Stefano Conte; Grazia Pellegrino; Giusi Barra; Raffaele De Palma; Akhmetzhan Sugraliyev; Paolo Golino; Giovanni Cimmino
Journal:  J Thromb Thrombolysis       Date:  2021-10-20       Impact factor: 2.300

2.  Comparing single-target and multitarget approaches for postoperative circulating tumour DNA detection in stage II-III colorectal cancer patients.

Authors:  Tenna Vesterman Henriksen; Thomas Reinert; Mads Heilskov Rasmussen; Christina Demuth; Uffe Schou Løve; Anders Husted Madsen; Kåre Andersson Gotschalck; Lene Hjerrild Iversen; Claus Lindbjerg Andersen
Journal:  Mol Oncol       Date:  2022-08-18       Impact factor: 7.449

3.  Droplet digital PCR for the detection of second-generation tyrosine kinase inhibitor-resistant BCR::ABL1 kinase domain mutations in chronic myeloid leukemia.

Authors:  Sara De Santis; Margherita Martelli; Cecilia Monaldi; Simona Soverini; Fausto Castagnetti; Gabriele Gugliotta; Cristina Papayannidis; Manuela Mancini; Samantha Bruno; Claudia Venturi; Katerina Machova Polakova; Thomas Ernst; Dianna Maar; Adam Corner; Michele Cavo
Journal:  Leukemia       Date:  2022-07-30       Impact factor: 12.883

4.  MYD88L265P Detection in IgM Monoclonal Gammopathies: Methodological Considerations for Routine Implementation.

Authors:  Martina Ferrante; Daniela Furlan; Silvia Zibellini; Michela Borriero; Chiara Candido; Nora Sahnane; Silvia Uccella; Elisa Genuardi; Beatrice Alessandria; Benedetta Bianchi; Barbara Mora; Daniele Grimaldi; Irene Defrancesco; Cristina Jiménez; Federica Cavallo; Dario Ferrero; Irene Dogliotti; Michele Merli; Marzia Varettoni; Simone Ferrero; Daniela Drandi
Journal:  Diagnostics (Basel)       Date:  2021-04-26

5.  A custom ddPCR method for the detection of copy number variations in the nebulin triplicate region.

Authors:  Lydia Sagath; Vilma-Lotta Lehtokari; Carina Wallgren-Pettersson; Katarina Pelin; Kirsi Kiiski
Journal:  PLoS One       Date:  2022-05-16       Impact factor: 3.240

6.  Development of a multiplex droplet digital PCR assay for detection of enterovirus, parechovirus, herpes simplex virus 1 and 2 simultaneously for diagnosis of viral CNS infections.

Authors:  Xunhua Zhu; Pengcheng Liu; Lijuan Lu; Huaqing Zhong; Menghua Xu; Ran Jia; Liyun Su; Lingfeng Cao; Yameng Sun; Meijun Guo; Jianyue Sun; Jin Xu
Journal:  Virol J       Date:  2022-04-20       Impact factor: 5.913

7.  Flow Cytometric Sorting of Infected Erythrocytes Demonstrates Reliable Detection of Individual Ring-Stage Plasmodium falciparum Parasites by Plasmodium 18S rRNA Reverse Transcription Polymerase Chain Reaction.

Authors:  Jokichi Matsubara; Ming Chang; Annette M Seilie; Sean C Murphy
Journal:  Am J Trop Med Hyg       Date:  2022-04-11       Impact factor: 3.707

8.  Detection of EGFR Mutations in Plasma cfDNA and Paired CTCs of NSCLC Patients before and after Osimertinib Therapy Using Crystal Digital PCR.

Authors:  Aliki Ntzifa; Athanasios Kotsakis; Vassilis Georgoulias; Evi Lianidou
Journal:  Cancers (Basel)       Date:  2021-05-31       Impact factor: 6.639

9.  Development of a liquid biopsy based purely quantitative digital droplet PCR assay for detection of MLH1 promoter methylation in colorectal cancer patients.

Authors:  Danyi Wang; Dennis O'Rourke; Jorge F Sanchez-Garcia; Ti Cai; Juergen Scheuenpflug; Zheng Feng
Journal:  BMC Cancer       Date:  2021-07-10       Impact factor: 4.430

10.  Analytical and Clinical Performance of Droplet Digital PCR in the Detection and Quantification of SARS-CoV-2.

Authors:  Kyoung Bo Kim; Hayoung Choi; Gun Dong Lee; Jaewoong Lee; Seungok Lee; Yonggoo Kim; Sung-Yeon Cho; Dong-Gun Lee; Myungshin Kim
Journal:  Mol Diagn Ther       Date:  2021-07-28       Impact factor: 4.074

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