Literature DB >> 32744250

Crystal structure of the extracellular domain of the receptor-like kinase TMK3 from Arabidopsis thaliana.

Hong Chen1, Yanqiong Kong2, Jia Chen1, Lan Li1, Xiushan Li1, Feng Yu1, Zhenhua Ming2.   

Abstract

Transmembrane kinases (TMKs) are members of the plant receptor-like kinase (RLK) family. TMKs are characterized by an extracellular leucine-rich-repeat (LRR) domain, a single transmembrane region and a cytoplasmic kinase domain. TMKs have been shown to act as critical modulators of cell expansion and cell proliferation. Here, the crystal structure of the extracellular domain of TMK3 (TMK3-ECD) was determined to a resolution of 2.06 Å, with an Rwork of 17.69% and an Rfree of 20.58%. Similar to the extracellular domain of TMK1, the TMK3-ECD structure contains two solenoids with 13 LRRs and a non-LRR region (316-364) between the tenth and 11th LRRs. A comparison of TMK3-ECD with other LRR-RLKs that contain a non-LRR region indicates that the non-LRR region plays a critical role in structural integrity and may contribute to ligand interactions. The non-LRR region of TMK3-ECD is characterized by two disulfide bonds that may have critical biological implications.

Entities:  

Keywords:  LRR-RLKs; TMK3; extracellular domain; non-LRR region; protein crystallography; transmembrane kinases

Mesh:

Substances:

Year:  2020        PMID: 32744250      PMCID: PMC7397464          DOI: 10.1107/S2053230X20010122

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  26 in total

1.  Receptor-like kinases from Arabidopsis form a monophyletic gene family related to animal receptor kinases.

Authors:  S H Shiu; A B Bleecker
Journal:  Proc Natl Acad Sci U S A       Date:  2001-08-28       Impact factor: 11.205

2.  TMK1-mediated auxin signalling regulates differential growth of the apical hook.

Authors:  Min Cao; Rong Chen; Pan Li; Yongqiang Yu; Rui Zheng; Danfeng Ge; Wei Zheng; Xuhui Wang; Yangtao Gu; Zuzana Gelová; Jiří Friml; Heng Zhang; Renyi Liu; Jun He; Tongda Xu
Journal:  Nature       Date:  2019-04-03       Impact factor: 49.962

Review 3.  The Structural Basis of Ligand Perception and Signal Activation by Receptor Kinases.

Authors:  Ulrich Hohmann; Kelvin Lau; Michael Hothorn
Journal:  Annu Rev Plant Biol       Date:  2017-01-11       Impact factor: 26.379

4.  Structural insight into brassinosteroid perception by BRI1.

Authors:  Ji She; Zhifu Han; Tae-Wuk Kim; Jinjing Wang; Wei Cheng; Junbiao Chang; Shuai Shi; Jiawei Wang; Maojun Yang; Zhi-Yong Wang; Jijie Chai
Journal:  Nature       Date:  2011-06-12       Impact factor: 49.962

5.  Structural basis of steroid hormone perception by the receptor kinase BRI1.

Authors:  Michael Hothorn; Youssef Belkhadir; Marlene Dreux; Tsegaye Dabi; Joseph P Noel; Ian A Wilson; Joanne Chory
Journal:  Nature       Date:  2011-06-12       Impact factor: 49.962

6.  Phylogenomic analysis of the receptor-like proteins of rice and Arabidopsis.

Authors:  Lillian K Fritz-Laylin; Nandini Krishnamurthy; Mahmut Tör; Kimmen V Sjölander; Jonathan D G Jones
Journal:  Plant Physiol       Date:  2005-06       Impact factor: 8.340

7.  Soybean disease resistance protein RHG1-LRR domain expressed, purified and refolded from Escherichia coli inclusion bodies: preparation for a functional analysis.

Authors:  Ahmed J Afzal; David A Lightfoot
Journal:  Protein Expr Purif       Date:  2006-12-27       Impact factor: 1.650

8.  Crystal structure of a plant leucine rich repeat protein with two island domains.

Authors:  Wen Song; Zhifu Han; Yadong Sun; Jijie Chai
Journal:  Sci China Life Sci       Date:  2013-12-26       Impact factor: 6.038

9.  The TMK subfamily of receptor-like kinases in Arabidopsis display an essential role in growth and a reduced sensitivity to auxin.

Authors:  Ning Dai; Wuyi Wang; Sara E Patterson; Anthony B Bleecker
Journal:  PLoS One       Date:  2013-04-16       Impact factor: 3.240

10.  Leucine-Rich Repeat (LRR) Domains Containing Intervening Motifs in Plants.

Authors:  Norio Matsushima; Hiroki Miyashita
Journal:  Biomolecules       Date:  2012-06-22
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