Literature DB >> 32739552

On the cortical connectivity in the macaque brain: A comparison of diffusion tractography and histological tracing data.

Gabriel Girard1, Roberto Caminiti2, Alexandra Battaglia-Mayer3, Etienne St-Onge4, Karen S Ambrosen5, Simon F Eskildsen6, Kristine Krug7, Tim B Dyrby8, Maxime Descoteaux4, Jean-Philippe Thiran9, Giorgio M Innocenti10.   

Abstract

Diffusion-weighted magnetic resonance imaging (DW-MRI) tractography is a non-invasive tool to probe neural connections and the structure of the white matter. It has been applied successfully in studies of neurological disorders and normal connectivity. Recent work has revealed that tractography produces a high incidence of false-positive connections, often from "bottleneck" white matter configurations. The rich literature in histological connectivity analysis studies in the macaque monkey enables quantitative evaluation of the performance of tractography algorithms. In this study, we use the intricate connections of frontal, cingulate, and parietal areas, well established by the anatomical literature, to derive a symmetrical histological connectivity matrix composed of 59 cortical areas. We evaluate the performance of fifteen diffusion tractography algorithms, including global, deterministic, and probabilistic state-of-the-art methods for the connectivity predictions of 1711 distinct pairs of areas, among which 680 are reported connected by the literature. The diffusion connectivity analysis was performed on a different ex-vivo macaque brain, acquired using multi-shell DW-MRI protocol, at high spatial and angular resolutions. Across all tested algorithms, the true-positive and true-negative connections were dominant over false-positive and false-negative connections, respectively. Moreover, three-quarters of streamlines had endpoints location in agreement with histological data, on average. Furthermore, probabilistic streamline tractography algorithms show the best performances in predicting which areas are connected. Altogether, we propose a method for quantitative evaluation of tractography algorithms, which aims at improving the sensitivity and the specificity of diffusion-based connectivity analysis. Overall, those results confirm the usefulness of tractography in predicting connectivity, although errors are produced. Many of the errors result from bottleneck white matter configurations near the cortical grey matter and should be the target of future implementation of methods.
Copyright © 2020 The Author(s). Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Connectivity; Cortico-cortical; Diffusion MRI; Ex-vivo; Histological tracing; Macaque monkey; Parieto-frontal network; Tractography; White matter

Year:  2020        PMID: 32739552     DOI: 10.1016/j.neuroimage.2020.117201

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  13 in total

1.  Mapping brain-wide excitatory projectome of primate prefrontal cortex at submicron resolution and comparison with diffusion tractography.

Authors:  Mingchao Yan; Wenwen Yu; Qian Lv; Qiming Lv; Tingting Bo; Xiaoyu Chen; Yilin Liu; Yafeng Zhan; Shengyao Yan; Xiangyu Shen; Baofeng Yang; Qiming Hu; Jiangli Yu; Zilong Qiu; Yuanjing Feng; Xiao-Yong Zhang; He Wang; Fuqiang Xu; Zheng Wang
Journal:  Elife       Date:  2022-05-20       Impact factor: 8.140

2.  Tractography dissection variability: What happens when 42 groups dissect 14 white matter bundles on the same dataset?

Authors:  Kurt G Schilling; François Rheault; Laurent Petit; Colin B Hansen; Vishwesh Nath; Fang-Cheng Yeh; Gabriel Girard; Muhamed Barakovic; Jonathan Rafael-Patino; Thomas Yu; Elda Fischi-Gomez; Marco Pizzolato; Mario Ocampo-Pineda; Simona Schiavi; Erick J Canales-Rodríguez; Alessandro Daducci; Cristina Granziera; Giorgio Innocenti; Jean-Philippe Thiran; Laura Mancini; Stephen Wastling; Sirio Cocozza; Maria Petracca; Giuseppe Pontillo; Matteo Mancini; Sjoerd B Vos; Vejay N Vakharia; John S Duncan; Helena Melero; Lidia Manzanedo; Emilio Sanz-Morales; Ángel Peña-Melián; Fernando Calamante; Arnaud Attyé; Ryan P Cabeen; Laura Korobova; Arthur W Toga; Anupa Ambili Vijayakumari; Drew Parker; Ragini Verma; Ahmed Radwan; Stefan Sunaert; Louise Emsell; Alberto De Luca; Alexander Leemans; Claude J Bajada; Hamied Haroon; Hojjatollah Azadbakht; Maxime Chamberland; Sila Genc; Chantal M W Tax; Ping-Hong Yeh; Rujirutana Srikanchana; Colin D Mcknight; Joseph Yuan-Mou Yang; Jian Chen; Claire E Kelly; Chun-Hung Yeh; Jerome Cochereau; Jerome J Maller; Thomas Welton; Fabien Almairac; Kiran K Seunarine; Chris A Clark; Fan Zhang; Nikos Makris; Alexandra Golby; Yogesh Rathi; Lauren J O'Donnell; Yihao Xia; Dogu Baran Aydogan; Yonggang Shi; Francisco Guerreiro Fernandes; Mathijs Raemaekers; Shaun Warrington; Stijn Michielse; Alonso Ramírez-Manzanares; Luis Concha; Ramón Aranda; Mariano Rivera Meraz; Garikoitz Lerma-Usabiaga; Lucas Roitman; Lucius S Fekonja; Navona Calarco; Michael Joseph; Hajer Nakua; Aristotle N Voineskos; Philippe Karan; Gabrielle Grenier; Jon Haitz Legarreta; Nagesh Adluru; Veena A Nair; Vivek Prabhakaran; Andrew L Alexander; Koji Kamagata; Yuya Saito; Wataru Uchida; Christina Andica; Masahiro Abe; Roza G Bayrak; Claudia A M Gandini Wheeler-Kingshott; Egidio D'Angelo; Fulvia Palesi; Giovanni Savini; Nicolò Rolandi; Pamela Guevara; Josselin Houenou; Narciso López-López; Jean-François Mangin; Cyril Poupon; Claudio Román; Andrea Vázquez; Chiara Maffei; Mavilde Arantes; José Paulo Andrade; Susana Maria Silva; Vince D Calhoun; Eduardo Caverzasi; Simone Sacco; Michael Lauricella; Franco Pestilli; Daniel Bullock; Yang Zhan; Edith Brignoni-Perez; Catherine Lebel; Jess E Reynolds; Igor Nestrasil; René Labounek; Christophe Lenglet; Amy Paulson; Stefania Aulicka; Sarah R Heilbronner; Katja Heuer; Bramsh Qamar Chandio; Javier Guaje; Wei Tang; Eleftherios Garyfallidis; Rajikha Raja; Adam W Anderson; Bennett A Landman; Maxime Descoteaux
Journal:  Neuroimage       Date:  2021-08-22       Impact factor: 7.400

3.  CONTINUITY: CONnectivity Tool with INtegration of sUbcortical regions, regIstration and visualization of TractographY.

Authors:  Elodie Piot; Maria Bagonis; Juan C Prieto; Martin Styner
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2022-04-04

4.  Multi-tract multi-symptom relationships in pediatric concussion.

Authors:  Guido I Guberman; Sonja Stojanovski; Eman Nishat; Alain Ptito; Danilo Bzdok; Anne L Wheeler; Maxime Descoteaux
Journal:  Elife       Date:  2022-05-17       Impact factor: 8.713

5.  Imaging versus electrographic connectivity in human mood-related fronto-temporal networks.

Authors:  Joshua A Adkinson; Evangelia Tsolaki; Sameer A Sheth; Brian A Metzger; Meghan E Robinson; Denise Oswalt; Cameron C McIntyre; Raissa K Mathura; Allison C Waters; Anusha B Allawala; Angela M Noecker; Mahsa Malekmohammadi; Kevin Chiu; Richard Mustakos; Wayne Goodman; David Borton; Nader Pouratian; Kelly R Bijanki
Journal:  Brain Stimul       Date:  2022-03-12       Impact factor: 9.184

6.  Intra-Areal Visual Topography in Primate Brains Mapped with Probabilistic Tractography of Diffusion-Weighted Imaging.

Authors:  K Tang-Wright; J E T Smith; H Bridge; K L Miller; T B Dyrby; B Ahmed; N L Reislev; J Sallet; A J Parker; K Krug
Journal:  Cereb Cortex       Date:  2022-06-07       Impact factor: 4.861

Review 7.  Quantitative mapping of the brain's structural connectivity using diffusion MRI tractography: A review.

Authors:  Fan Zhang; Alessandro Daducci; Yong He; Simona Schiavi; Caio Seguin; Robert E Smith; Chun-Hung Yeh; Tengda Zhao; Lauren J O'Donnell
Journal:  Neuroimage       Date:  2022-01-01       Impact factor: 7.400

Review 8.  The parietal lobe evolution and the emergence of material culture in the human genus.

Authors:  Emiliano Bruner; Alexandra Battaglia-Mayer; Roberto Caminiti
Journal:  Brain Struct Funct       Date:  2022-04-22       Impact factor: 3.748

9.  The Complex Hodological Architecture of the Macaque Dorsal Intraparietal Areas as Emerging from Neural Tracers and DW-MRI Tractography.

Authors:  Roberto Caminiti; Gabriel Girard; Alexandra Battaglia-Mayer; Elena Borra; Andrea Schito; Giorgio M Innocenti; Giuseppe Luppino
Journal:  eNeuro       Date:  2021-07-07

Review 10.  The functional characterization of callosal connections.

Authors:  Giorgio M Innocenti; Kerstin Schmidt; Chantal Milleret; Mara Fabri; Maria G Knyazeva; Alexandra Battaglia-Mayer; Francisco Aboitiz; Maurice Ptito; Matteo Caleo; Carlo A Marzi; Muhamed Barakovic; Franco Lepore; Roberto Caminiti
Journal:  Prog Neurobiol       Date:  2021-11-12       Impact factor: 11.685

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