| Literature DB >> 32738184 |
Pu Xia1, Anna Dubrovska1,2,3,4,5.
Abstract
Coronavirus disease 2019 (COVID-19), the highly contagious illness caused by a novel severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), has spread across the globe, becoming one of the most challenging public health crisis of our times. SARS-CoV-2 can cause severe disease associated with multiple organ damage. Cancer patients have a higher risk of SARS-CoV-2 infection and death. While the virus uses angiotensin-converting enzyme 2 (ACE2) as the primary entry receptor, the recent experimental and clinical findings suggest that some tumor markers, including CD147 (basigin), can provide an additional entry for SARS-CoV-2 infection through binding to the viral spike (S) protein. In the absence of specific viral drugs, blocking of CD147 might be a way to prevent virus invasion. Identifying other target proteins is of high importance as targeting the alternative receptors for SARS-CoV-2 might open up a promising avenue for the treatment of COVID-19 patients, including those who have cancer.Entities:
Keywords: Basigin; CD147; COVID-19; Emmprin; SARS-CoV-2; spike protein
Mesh:
Substances:
Year: 2020 PMID: 32738184 PMCID: PMC7436716 DOI: 10.1111/febs.15499
Source DB: PubMed Journal: FEBS J ISSN: 1742-464X Impact factor: 5.622
Fig. 1(A) Tumor cells overexpress potential SARS‐CoV‐2 receptors. (B) The gene expression profile across all tumor samples and paired normal tissues. The data are obtained using Gene Expression Profiling Interactive Analysis based on The Cancer Genome Atlas (TCGA) data. Relative gene expression is shown as transcripts per kilobase million (TPM). TCGA Study Abbreviations: ACC, adrenocortical carcinoma; BLCA, bladder urothelial carcinoma; BRCA, breast invasive carcinoma; CESC, cervical squamous cell carcinoma and endocervical adenocarcinoma; CHOL, cholangiocarcinoma; COAD, colon adenocarcinoma; DLBC, lymphoid neoplasm diffuse large B‐cell lymphoma; ESCA, esophageal carcinoma; GBM, glioblastoma multiforme; HNSC, head and neck squamous cell carcinoma; KICH, kidney chromophobe; KIRC, kidney renal clear cell carcinoma; KIRP, kidney renal papillary cell carcinoma; LAML, acute myeloid leukemia; LGG, brain lower grade glioma; LIHC, liver hepatocellular carcinoma; OV, ovarian serous cystadenocarcinoma; PAAD, pancreatic adenocarcinoma; PCPG, pheochromocytoma and paraganglioma; PRAD, prostate adenocarcinoma; READ, rectum adenocarcinoma; SARC, sarcoma; SKCM, skin cutaneous melanoma; STAD, stomach adenocarcinoma; TGCT, testicular germ cell tumors; THCA, thyroid carcinoma; THYM, thymoma; UCEC, uterine corpus endometrial carcinoma; UCS, uterine carcinosarcoma. (C) Predicting the complex of the host cell protein CD147 and coronavirus spike protein (SP) using the Hex 8.0 docking approach. BSG protein structure was downloaded from RCSB Protein Data Bank (PDB code: 3B5H). Based on homologous modeling, a PDB formatted file containing the predicted structure of coronavirus SP was generated by phyre2 software (http://www.sbg.bio.ic.ac.uk/phyre2) [26]. The tentative BSG‐SP docking was displayed using the HEX 8.0 program [27, 28]. 3D model of BSG and SP interaction was analyzed by HEX 8.0 with fast Fourier transform (FFT) algorithm using the following parameters: Correlation type—Shape + Electro+DRAS; FFT Mode—3D; Post‐processing—none; Grid dimension—0.6; Solutions—2000; Receptor range—180; Ligand range—180; Twist range—360; Distance range—40.