Literature DB >> 32730196

Hymenobacter polaris sp. nov., a psychrotolerant bacterium isolated from an Arctic station.

Ram Hari Dahal1, Dhiraj Kumar Chaudhary2, Dong-Uk Kim3, Jaisoo Kim1.   

Abstract

A pink-pigmented, non-motile, Gram-stain-negative, rod-shaped bacterium, designated RP-2-7T, was obtained from soil sampled at the Arctic station, Spitsbergen, Svalbard, Norway. Cells were strictly aerobic, psychrotolerant, grew optimally at 15-20 °C and hydrolysed CM-cellulose. Phylogenetic analysis based on its 16S rRNA gene sequence revealed that strain RP-2-7T formed a lineage within the family Hymenobacteraceae and clustered with members of the genus Hymenobacter. Its closest relative was Hymenobacter marinus KJ035T (97.6 % sequence similarity). The sequence similarities to other strains were ≤96.9 %. The principal respiratory quinone was MK-7 and the major polar lipids were phosphatidylethanolamine and an unidentified aminophospholipid. The predominant cellular fatty acids were summed feature 3 (C16 : 1  ω7c and/or C16 : 1  ω6c), anteiso-C15 : 0, iso-C15 : 0, C16 : 1  ω5c and summed featured 4 (iso-C17 : 1 I and/or anteiso-C17 : 1 B). The DNA G+C content was 62.8 mol%. In addition, the average nucleotide identity and in silico DNA-DNA hybridization relatedness values between strain RP-2-7T and closely related strains were lower than species demarcation thresholds. Based on the resuls of genomic, chemotaxonomic, phenotypic and phylogenetic analyses, strain RP-2-7T represents novel species in the genus Hymenobacter, for which the name Hymenobacter polaris sp. nov. is proposed. The type strain is RP-2-7T (=KACC 21670T=NBRC 114391T).

Entities:  

Keywords:  Arctic soil; Bacteroidetes; Hymenobacter polaris; Hymenobacteraceae; psychrotolerant

Mesh:

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Year:  2020        PMID: 32730196     DOI: 10.1099/ijsem.0.004356

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  3 in total

1.  Hymenobacter telluris sp. nov., isolated from soil in South Korea.

Authors:  Tuvshinzaya Damdintogtokh; Yuna Park; Soohyun Maeng; Hye Jin Oh; Minji Bang; Young Koung Lee; Jaesung Oh; Jaewoo Bai; Myung Kyum Kim
Journal:  Arch Microbiol       Date:  2022-01-04       Impact factor: 2.552

2.  Hymenobacter translucens sp. nov. and Hymenobacter pini sp. nov. isolated from soil.

Authors:  Minji Bang; Myung Kyum Kim; Hee-Young Jung
Journal:  Arch Microbiol       Date:  2022-06-06       Impact factor: 2.667

3.  Hymenobacter properus sp. nov., Hymenobacter ruricola sp. nov., and Hymenobacter jeongseonensis sp. nov., three new species isolated from mountain and beach soil in South Korea.

Authors:  Minji Bang; Sathiyaraj Srinivasan; Gayathri Sathiyaraj
Journal:  Antonie Van Leeuwenhoek       Date:  2021-05-27       Impact factor: 2.271

  3 in total

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