Literature DB >> 32727743

A Thermosensitive, Phase-Variable Epigenetic Switch: pap Revisited.

Mario Zamora1,2, Christine A Ziegler3, Peter L Freddolino3,4, Alan J Wolfe5.   

Abstract

It has been more than a decade since the last comprehensive review of the phase-variable uropathogen-associated pyelonephritis-associated pilus (pap) genetic switch. Since then, important data have come to light, including additional factors that regulate pap expression, better characterization of H-NS regulation, the structure of the Lrp octamer in complex with pap regulatory DNA, the temperature-insensitive phenotype of a mutant lacking the acetyltransferase RimJ, evidence that key components of the regulatory machinery are acetylated, and new insights into the role of DNA binding by key regulators in shaping both the physical structure and regulatory state of the papI and papBA promoters. This review revisits pap, integrating these newer observations with older ones to produce a new model for the concerted behavior of this virulence-regulatory region.
Copyright © 2020 American Society for Microbiology.

Entities:  

Keywords:  acetylation; bacteria; epigenetics; gene silencing; genetic models; histone; nucleoid-associated protein; phase variation; pili; protein acetylation; temperature; transcription

Mesh:

Substances:

Year:  2020        PMID: 32727743      PMCID: PMC7392537          DOI: 10.1128/MMBR.00030-17

Source DB:  PubMed          Journal:  Microbiol Mol Biol Rev        ISSN: 1092-2172            Impact factor:   11.056


  117 in total

1.  Influence of L-leucine and L-alanine on Lrp regulation of foo, coding for F1651, a Pap homologue.

Authors:  Frédéric Berthiaume; Cécile Crost; Vincent Labrie; Christine Martin; Elaine B Newman; Josée Harel
Journal:  J Bacteriol       Date:  2004-12       Impact factor: 3.490

2.  H-NS is a part of a thermally controlled mechanism for bacterial gene regulation.

Authors:  Shusuke Ono; Martin D Goldberg; Tjelvar Olsson; Diego Esposito; Jay C D Hinton; John E Ladbury
Journal:  Biochem J       Date:  2005-10-15       Impact factor: 3.857

3.  Genomic diversity and fitness of E. coli strains recovered from the intestinal and urinary tracts of women with recurrent urinary tract infection.

Authors:  Swaine L Chen; Meng Wu; Jeffrey P Henderson; Thomas M Hooton; Michael E Hibbing; Scott J Hultgren; Jeffrey I Gordon
Journal:  Sci Transl Med       Date:  2013-05-08       Impact factor: 17.956

4.  Leucine-responsive regulatory protein plays dual roles as both an activator and a repressor of the Escherichia coli pap fimbrial operon.

Authors:  M W van der Woude; L S Kaltenbach; D A Low
Journal:  Mol Microbiol       Date:  1995-07       Impact factor: 3.501

Review 5.  Virulence factors of uropathogenic E. coli and their interaction with the host.

Authors:  Petra Lüthje; Annelie Brauner
Journal:  Adv Microb Physiol       Date:  2014-11-04       Impact factor: 3.517

6.  Quantitative whole-genome analysis of DNA-protein interactions by in vivo methylase protection in E. coli.

Authors:  S Tavazoie; G M Church
Journal:  Nat Biotechnol       Date:  1998-06       Impact factor: 54.908

7.  Differentiation and developmental pathways of uropathogenic Escherichia coli in urinary tract pathogenesis.

Authors:  Sheryl S Justice; Chia Hung; Julie A Theriot; Daniel A Fletcher; Gregory G Anderson; Matthew J Footer; Scott J Hultgren
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-22       Impact factor: 11.205

8.  Genome-wide analysis of deoxyadenosine methyltransferase-mediated control of gene expression in Escherichia coli.

Authors:  Taku Oshima; Chieko Wada; Yuya Kawagoe; Takeshi Ara; Maki Maeda; Yasushi Masuda; Sota Hiraga; Hirotada Mori
Journal:  Mol Microbiol       Date:  2002-08       Impact factor: 3.501

Review 9.  Mechanisms, Detection, and Relevance of Protein Acetylation in Prokaryotes.

Authors:  D G Christensen; J T Baumgartner; X Xie; K M Jew; N Basisty; B Schilling; M L Kuhn; A J Wolfe
Journal:  mBio       Date:  2019-04-09       Impact factor: 7.867

10.  Suppression of a cold-sensitive mutation in ribosomal protein S5 reveals a role for RimJ in ribosome biogenesis.

Authors:  Biswajoy Roy-Chaudhuri; Narayanaswamy Kirthi; Teresa Kelley; Gloria M Culver
Journal:  Mol Microbiol       Date:  2008-05-06       Impact factor: 3.501

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  4 in total

Review 1.  Nucleoid-associated proteins shape chromatin structure and transcriptional regulation across the bacterial kingdom.

Authors:  Haley M Amemiya; Jeremy Schroeder; Peter L Freddolino
Journal:  Transcription       Date:  2021-09-09

2.  Clostridioides difficile specific DNA adenine methyltransferase CamA squeezes and flips adenine out of DNA helix.

Authors:  Jujun Zhou; John R Horton; Robert M Blumenthal; Xing Zhang; Xiaodong Cheng
Journal:  Nat Commun       Date:  2021-06-08       Impact factor: 14.919

Review 3.  The leucine-responsive regulatory proteins/feast-famine regulatory proteins: an ancient and complex class of transcriptional regulators in bacteria and archaea.

Authors:  Christine A Ziegler; Peter L Freddolino
Journal:  Crit Rev Biochem Mol Biol       Date:  2021-06-20       Impact factor: 8.697

4.  Genomics of human and chicken Salmonella isolates in Senegal: Broilers as a source of antimicrobial resistance and potentially invasive nontyphoidal salmonellosis infections.

Authors:  Yakhya Dieye; Dawn M Hull; Abdoul Aziz Wane; Lyndy Harden; Cheikh Fall; Bissoume Sambe-Ba; Abdoulaye Seck; Paula J Fedorka-Cray; Siddhartha Thakur
Journal:  PLoS One       Date:  2022-03-24       Impact factor: 3.240

  4 in total

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