| Literature DB >> 32727057 |
Paolo Biscarini1, Ivano Bilotti1, Francesco Ferranti1, Alessia Bacchi2, Giancarlo Pelizzi2, Marian Mikołajczyk3, Jozef Drabowicz3,4.
Abstract
Optically active (-)589ethyl (S)-2-phenylbutyl thioether, (-)(S)C-Et(PhBu)S (I), and its new diastereoisomeric mercury (II) chloride adduct, 1:2, (-)[(S)S(S)C-Et(PhBu)S.(HgCl2)2]2, (II) were stereoselectively synthesized; the absorbance (UV) and circular dichroism (CD) spectra were measured and the crystal and molecular structure of complex (II) was determined by single-crystal X-ray diffraction. Two different Hg centres are present whose coordination environments are built by two short bonds to chloride ligands in one case, and to one chloride and one sulphur in the other one. These originate digonal units. Electroneutrality is achieved by a further chlorine, which can be considered prevalently ionic and bonded to the two Hg centres, forming square bridging systems nearly perpendicular to the digonal molecules. The coordination polyhedra can be interpreted as 2 + 4 tetragonally-compressed octahedra with the four longer contacts lying in the equatorial plane. IR spectroscopic data are consistent with the presence of one bent and one linear Cl-Hg-Cl moiety. The absolute configurations at both stereogenic centres of the formed diastereoisomeric complex (II) are (S). The (S)S absolute configuration at the stereogenic sulphur atom bonded to the mercury(II) atom in complex (II) has been related with the negative Cotton effect assigned in its circular dichroism (CD) spectrum to a charge-transfer transition at ca. 230 nm. The stereoselective oxidation of (I) and (II) with hydrogen peroxide, induced by the stereogenic carbon atom (S)C of the enantiopure sulphide, gave (-)598ethyl (S)C-2-phenylbutyl(S)S-sulphoxide, (-)598[(S)S(S)C-Et(PhBu)SO], (III), having 18.1% de. Oxidations carried out in the presence of a 200 molar excess of mercury(II) chloride gave (-)598ethyl (S)C-2-phenylbutyl(R)S-sulphoxide, (-) 598[(R)S(S)C-Et(PhBu)SO], (IV) with 31% de, showing the cooperative influence of mercury(II) chloride on the selectivity of the oxidation reaction.Entities:
Keywords: X-ray crystallography; absolute configuration; asymmetric oxidation; chirality; circular dichroism; sulphide mercury chloride complex
Year: 2020 PMID: 32727057 PMCID: PMC7435776 DOI: 10.3390/molecules25153398
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Crystal data and structure refinement for (II).
| Chemical Formula | C12 H18 Cl4 Hg2 S |
|---|---|
| Formula weight | 737.30 |
| Temperature | 293(2) K |
| Wavelength | 1.54178 Å |
| Crystal system | orthorhombic |
| Space group | |
| Unit cell dimensions | a = 8.208(3) Å |
| b = 29.476(9) Å | |
| c = 7.603(3) Å | |
| Volume | 1839(1) Å3 |
| Z | 4 |
| Density (calculated) | 2.662 Mg/m3 |
| Absorption coefficient | 35.798 mm−1 |
| F(000) | 1336 |
| range for data collection | 6 to 70° |
| Index ranges | 9 ≤ h ≤ 9, 0 ≤ k ≤ 35, 0 ≤ l ≤ 9 |
| Reflections collected | 3806 |
| Independent reflections | 3486 [R(int) = 0.1424 |
| Refinement method | Full-matrix least-squares on F2 |
| Data/restraints/parameters | 3486/00/176 |
| Goodness-of-fit on F2 | 1.237 |
| Final R indices [I > 2σ(I)] | R1 = 0.1314, wR2 = 0.3058 |
| R indices (all data) | R1 = 0.1443, wR2 = 0.3343 |
| Absolute structure parameter | 0.01(7) |
| Extinction coefficient | 0.00035(14) |
| Largest ΔF maximum/minimum | 6.866 / −3.415 e.Å−3 |
Scheme 1An equilibrium between the free ligand () and HgCl2.
Scheme 2Diastereoisomers of sulphide (I) with mercury chloride.
Figure 1Asymmetric unit and labelling of the crystal structure of compound (II). Thermal ellipsoids are at the 50% probability level.
Figure 2Top: Arrangement of the SHgCl+∙HgCl2 units (black bonds) in puckered ribbons (white bonds), assembled with the assistance of Cl1 and Cl5 anions (dashed bonds). Bottom: polymeric chains viewed along the c axis.
Figure 3Packing arrangement of (II), showing interdigitation of organic moieties in the assembly of polymeric ribbons.
Figure 4(a) CD spectrum of a diluted ethanolic solution of (−)[(S)S(S)C-Et(PhBu)S.2HgCl2,(II); (b) CD spectrum of an ethanolic solution of (−)[(S)S(S)C-Et(PhBu)S.2HgCl2,(II) after the addition of 200 mmol of HgCl2.
Scheme 3The oxidation of the 1:2 complex of (−)(R)S(S)C-Et(PhBu) with HgCl2 alone and in the presence of an excess of mercury (II) chloride.
Figure 5(a) CD spectrum of a n-heptane solution of: (−)(S)(S)-Et(PhBu)SO, (III) with de 18%; (b) CD spectrum of a n-heptane solution of: (−)(R)(S)-Et(PhBu)SO (IV) with de 31% obtained by decomposition of the complex of Reaction (3).