| Literature DB >> 32724857 |
Nasim Salimiaghdam1, Lata Singh1, Kevin Schneider1, Angele Nalbandian1, Marilyn Chwa1, Shari R Atilano1, Andrea Bao1, M Cristina Kenney2,3.
Abstract
BACKGROUND: We aim to determine the possible adverse effects of ciprofloxacin (CPFX) and tetracycline (TETRA), as examples of bactericidal and bacteriostatic agents, respectively, on cultured human retinal pigment epithelial cells (ARPE-19).Entities:
Keywords: apotosis; drugs; retina
Year: 2020 PMID: 32724857 PMCID: PMC7375423 DOI: 10.1136/bmjophth-2020-000458
Source DB: PubMed Journal: BMJ Open Ophthalmol ISSN: 2397-3269
Information of the genes related to apoptotic, inflammatory and antioxidant pathways
| Symbol | Gene name | GenBank | Function |
| BAX | BCL2-associated X | NM_001291429 | This gene encodes a mitochondrially localised protein with conserved B-cell lymphoma two homology motifs. Overexpression of the encoded protein induces apoptosis. |
| NM_001291428 | |||
| NM_001291430 | |||
| NM_001291431 | |||
| NM_004324 | |||
| NM_138761 | |||
| NM_138763 | |||
| NM_138764 | |||
| BCL2-L13 | BCL2 like 13 | NM_015367 | Encodes a mitochondrially localised protein, apoptosis inducer. |
| NM_001270729 | |||
| NM_001270731 | |||
| NM_001270732 | |||
| NM_001270734 | |||
| NM_001270735 | |||
| BCL2 | BCL2 apoptosis regulator | NM_000633 | Encodes an integral outer mitochondrial membrane protein that blocks the apoptotic death of some cells (eg, lymphocytes). |
| CASP-3 | Caspase 3, apoptosis-related cysteine peptidase | NM_004346 | Encodes protein as a cysteine-aspartic acid protease that plays a central role in the execution phase of cell apoptosis. |
| NM_032991 | |||
| CASP-7 | Caspase 7, apoptosis-related cysteine peptidase | NM_145248, | This gene encodes a member of the cysteine-aspartic acid protease (Caspase) family. Sequential activation of caspases plays a central role in the execution phase of cell apoptosis. |
| XM_006725153. | |||
| XM_006725154, | |||
| XM_005268295, | |||
| XM_006725155, | |||
| XM_005268294, | |||
| XM_006719962 | |||
| CASP-9 | Caspase 9, apoptosis-related cysteine peptidase | NM_0 01 229 | Encodes a member of the cysteine aspartic acid protease (caspase) family, which is involved in the execution phase of cell apoptosis. |
| IL-1β | IL-1, beta | NM_000576 | Produced by activated macrophages, IL-1 stimulates thymocyte proliferation. The protein encoded by this gene is a member of the IL-1 cytokine family. This cytokine is a pleiotropic cytokine involved in various immune responses, inflammatory processes and haematopoiesis |
| IL-6 | IL-6 | NM_000600 | This gene encodes a cytokine that functions in inflammation and the maturation of B cells. In addition, the encoded protein has been shown to be an endogenous pyrogen capable of inducing fever in people with autoimmune diseases or infections. |
| IL-33 | IL-33 | NM_033439 | The protein encoded by this gene is a cytokine that binds to the IL1RL1/ST2 receptor. The encoded protein is involved in the maturation of Th2 cells and the activation of mast cells, basophils, eosinophils and natural killer cells. |
| NM_001199640 | |||
| NM_001127180 | |||
| TGF-α | TGF alpha | NM_003236 | This gene encodes a growth factor that is a ligand for the epidermal growth factor receptor, which activates a signalling pathway for cell proliferation, differentiation and development. This protein may act as either a transmembrane-bound ligand or a soluble ligand. |
| NM_001099691 | |||
| TGF-β1 | TGF beta-1-like | NM_003238 | This gene is a polypeptide member of the TGF beta superfamily of cytokines. It is a secreted protein that performs many cellular functions, including the control of cell growth, cell proliferation, cell differentiation and apoptosis. |
| TGF-β2 | TGF beta 2 | NM_001135599 | This gene encodes a secreted ligand of the TGF-beta superfamily of proteins. Ligands of this family bind various TGF-beta receptors leading to recruitment and activation of SMAD family transcription factors that regulate gene expression. |
| SOD2 | Superoxide dismutase 2 | NM_000636 | This gene is a member of the iron/manganese superoxide dismutase family. It encodes a mitochondrial protein that forms a tetrameter and binds one manganese ion per subunit. This protein binds to the superoxide byproducts of oxidative phosphorylation and converts them to hydrogen peroxide and diatomic oxygen. |
| SOD3 | Superoxide dismutase 3 | NM-003102 | This gene encodes a member of the SOD protein family, which catalyses the conversion of superoxide radicals into hydrogen peroxide and oxygen, effective in protection of the brain, lungs and other tissues from oxidative stress. |
| GPX3 | Glutathione peroxidase 3 | NM_002084 | The protein encoded by this gene belongs to the glutathione peroxidase family, members of which catalyse the reduction of organic hydroperoxides and hydrogen peroxide (H2O2) by glutathione, and thereby protect cells against oxidative damage. Several isozymes of this gene family exist in vertebrates, which vary in cellular location and substrate specificity. |
| SOD2 | Superoxide dismutase 2 | NM_000636 | This gene is a member of the iron/manganese superoxide dismutase family. It encodes a mitochondrial protein that forms a homotetramer and binds one manganese ion per subunit. This protein binds to the superoxide byproducts of oxidative phosphorylation and converts them to hydrogen peroxide and diatomic oxygen. |
| SOD3 | Superoxide dismutase 3 | NM-003102 | This gene encodes a member of the SOD protein family, which catalyses the conversion of superoxide radicals into hydrogen peroxide and oxygen, effective in protection of the brain, lungs and other tissues from oxidative stress. |
| GPX3 | Glutathione peroxidase 3 | NM_002084 | The protein encoded by this gene belongs to the glutathione peroxidase family, members of which catalyse the reduction of organic H2O2 by glutathione, and thereby protect cells against oxidative damage. Several isozymes of this gene family exist in vertebrates, which vary in cellular location and substrate specificity. |
| NOX4 | NADPH oxidase 4 | NM_001143836 | This gene encodes a member of the NOX-family of enzymes that functions as the catalytic subunit the NADPH oxidase complex. The encoded protein is localised to non-phagocytic cells where it acts as an oxygen sensor and catalyses the reduction of molecular oxygen to various reactive oxygen species. |
| NM_016931 | |||
| NM_001143837 | |||
| NR_026571 | |||
| NM_001291926 | |||
| NM_001300995 | |||
| XM_006718848 | |||
| NM_001291927 | |||
| XM_006718852 | |||
| XM_006718853 | |||
| NM_001291929 | |||
| XM_006718849 |
IL-1, interleukin-1; SOD, superoxide dismutase; TGF, transforming growth factor.
Figure 1Treatment effects of CPFX and TETRA on cellular metabolism (figure 1A, B), ROS levels (figure 1C, D) and mitochondrial membrane potential (MMP, figure 1E, F) in ARPE-19 cells after 24, 48 and 72 hours as measured with the MTT, H2DCFDA and JC-1 assays. *P<0.05, **P<0.01. ARPE-19, human retinal pigment epithelial cells; CPFX, ciprofloxacin; H2DCFDA, 2’,7’-dichlorodihydrofluorescein diacetate; ns, not significant; ROS, reactive oxygen species; TETRA, tetracycline.
Expression levels in ARPE-19 Treated cells with CPFX and TETRA compared with vehicle-treated controls
| Symbol | Treated cells with CPFX versus vehicle-control* | Treated cells with TETRA versus vehicle-control* |
| Apoptosis-regulator genes | ||
| BAX | 0.002 | 0.04 |
| 1.977±0.03 | 1.465±0.09 | |
| BCL2-L13 | 0.014 | 0.026 |
| 1.41±0.02 | 1.14±0.03 | |
| BCl2 | 0.061 | 0.024 |
| 1.76±0.04 | 2.82±0.56 | |
| CASP3 | 0.246 | 0.250 |
| 1.39±0.09 | 1.25±0.30 | |
| CASP7 | 0.003 | 0.002 |
| 1.71±0.02 | 1.71±0.02 | |
| CASP9 | 0.013 | 0.007 |
| 2.13±0.19 | 1.43±0.03 | |
| Antioxidant enzymes related genes | ||
| SOD2 | 0.014 | 0.048 |
| 1.26±0.06 | 1.27±0.07 | |
| SOD3 | 0.24 | 0.041 |
| 0.80±0.05 | 0.41±0.05 | |
| NOX4 | 0.031 | 0.045 |
| 0.84±0.06 | 0.37±0.02 | |
| GPX3 | 0.018 | 0.249 |
| 1.24±0.06 | 0.69±0.01 | |
| Inflammatory pathway genes | ||
| IL-6 | 0.048 | 0.001 |
| 1.31±0.03 | 5.11±0.16 | |
| IL-1β | 0.86 | 0.023 |
| 0.31±0.05 | 2.29±0.19 | |
| IL-33 | 0.047 | 0.011 |
| 0.34±0.04 | 0.11±0.008 | |
| TGF-α1 | 0.211 | 0.014 |
| 0.67±0.06 | 0.41±0.02 | |
| TGF-β1 | 0.061 | 0.043 |
| 1.003±0.08 | 0.54±0.02 | |
| TGF-β2 | 0.410 | 0.177 |
| 0.62±0.04 | 0.74±0.07 | |
Fold values greater than 1 indicate upregulation of the gene.
Fold values less than 1 indicate downregulation of the gene.
*Are assigned a value of 1.
ARPE-19, human retinal pigment epithelial cells; CPFX, ciprofloxacin; IL-6, interleukin-6; TETRA, tetracycline; TGF-β1, transforming growth factor-β1.
Figure 2Expression of apoptotic genes (A) BAX, (B) BCL2-L13, (C) BCL-2, (D) CASP-3, (E) CASP-7 and (F) CASP-9 in CPFX and TETRA treated ARPE19 cells. *P<0.05, **P<0.01, ***P<0.001. ARPE19, human retinal pigment epithelial cells; Cont, untreated control; CPFX, ciprofloxacin; HCl, hydrochloric acid vehicle control; Meth, methanol vehicle control; ns, not significant; TETRA, tetracycline.
Figure 3Expression of antioxidant genes (A) SOD2, (B) SOD3, (C) NOX4 (D) GPX3 in CPFX and TETRA treated ARPE19 cells. *P<0.05, **P<0.01, ***P<0.001. ARPE19, human retinal pigment epithelial cells; Cont, untreated control; CPFX, ciprofloxacin; HCL, hydrochloric acid vehicle control; Meth, methanol vehicle control; ns, not significant; TETRA, tetracycline.
Figure 4Expression of inflammatory pathway genes (A) IL-6, (B) IL-1β, (C) IL-33, (D) TGF-α1, (E) TGF-β1 and (F) TGF-β2 in CPFX and TETRA treated ARPE19 cells. *P<0.05, **P<0.01, ***P<0.001. ARPE19, human retinal pigment epithelial cells; Cont, untreated control; CPFX, ciprofloxacin; HCl, hydrochloric acid vehicle control; IL-6, interleukin-6; Meth, methanol vehicle control; ns, not significant; TETRA, tetracycline; TGF-β1, transforming growth factor-β1.
Figure 5Effects of TETRA and CPFX on the of mtDNA copy number level compared with nDNA. *P<0.05, **P<0.01. Cont, untreated control; CPFX, ciprofloxacin; HCL, hydrochloric acid vehicle control; Meth, methanol vehicle control; mtDNA, mitochondrial DNA; ns, not significant; TETRA, tetracycline.