Literature DB >> 32713538

IMPACT: Imaging phospholipase d activity with clickable alcohols via transphosphatidylation.

Timothy W Bumpus1, Dongjun Liang1, Jeremy M Baskin2.   

Abstract

Phospholipase Ds (PLDs) are multifunctional and disease-relevant enzymes operating at the center of phospholipid metabolism and signaling. Physiologically, they hydrolyze abundant phospholipids into phosphatidic acid (PA), a potent lipid second messenger and central biosynthetic intermediate. Given the pleiotropic nature of PA, the multiple locations of PLD activity within single cells, and differences in PLD activities across cell types in vivo, tools with spatiotemporal precision are urgently needed to dissect the signaling functions of PLDs. Here, we describe a toolset for visualizing and quantifying cellular PLD activity with high spatial and temporal resolution. Our approach capitalizes on the ability of PLDs to catalyze transphosphatidylation reactions with exogenous alcohols to generate phosphatidyl alcohols, lipids whose location and abundance report on the extent of PLD-mediated PA synthesis. Our key innovation is to employ functionalized, "clickable," alcohols as PLD substrates, which enables subsequent tagging of the resultant phosphatidyl alcohols with fluorophores or other functional probes for detection via highly selective click chemistry reactions. In this chapter, we describe this method, termed IMPACT (Imaging PLD Activity with Clickable Alcohols via Transphosphatidylation), which can be coupled to downstream analysis by fluorescence microscopy, flow cytometry, HPLC, or mass spectrometry. We describe two variants of IMPACT, one with greater sensitivity, for detecting PLD activity at single-cell and population levels, and one with greater spatiotemporal resolution ("real-time," or RT-IMPACT), for accurately visualizing PLD activity at the subcellular, individual-organelle level. Together, IMPACT represents a major advance in our ability to dissect PLD-mediated PA signaling in native biological settings.
© 2020 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Click chemistry; Imaging; Lipid signaling; Phosphatidic acid; Phospholipase d; Phospholipids; Transphosphatidylation

Mesh:

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Year:  2020        PMID: 32713538     DOI: 10.1016/bs.mie.2020.04.037

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  3 in total

1.  Click chemistry-enabled CRISPR screening reveals GSK3 as a regulator of PLD signaling.

Authors:  Timothy W Bumpus; Shiying Huang; Reika Tei; Jeremy M Baskin
Journal:  Proc Natl Acad Sci U S A       Date:  2021-11-30       Impact factor: 11.205

2.  Activity-based, bioorthogonal imaging of phospholipase D reveals spatiotemporal dynamics of GPCR-Gq signaling.

Authors:  Dongjun Liang; Ross W Cheloha; Tomoyuki Watanabe; Thomas J Gardella; Jeremy M Baskin
Journal:  Cell Chem Biol       Date:  2021-06-22       Impact factor: 8.116

3.  Click chemistry and optogenetic approaches to visualize and manipulate phosphatidic acid signaling.

Authors:  Reika Tei; Jeremy M Baskin
Journal:  J Biol Chem       Date:  2022-03-08       Impact factor: 5.157

  3 in total

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