| Literature DB >> 32708082 |
Joanna Depciuch1, Agata Stanek-Widera2, Nadia Khinevich3, Hanna V Bandarenka3,4, Michal Kandler5, Vadim Bayev6, Julia Fedotova6, Dariusz Lange2, Jadwiga Stanek-Tarkowska7, Jozef Cebulski5.
Abstract
Lymph nodes (LNs) play a very important role in the spread of cancer cells. Moreover, it was noticed that the morphology and chemical composition of the LNs change in the course of cancer development. Therefore, finding and monitoring similarities between these characteristics of the LNs and tumor tissues are essential to improve diagnostics and therapy of this dreadful disease. In the present study, we used Raman and Fourier transform infrared (FTIR) spectroscopies to compare the chemical composition of the breast cancer tissues and LNs collected from women without (I group-4 patients) and with (II group-4 patients) recurrence. It was shown that the similarity of the chemical composition of the breast tissues and LNs is typical for the II group of the patients. The average Raman spectrum of the breast cancer tissues from the I group was not characterized by vibrations in the 800-1000 cm-1 region originating from collagen and carbohydrates, which are typical for tumor-affected breast tissues. At the same time, this spectrum contains peaks at 1029 cm-1, corresponding to PO2- from DNA, RNA and phospholipids, and 1520 cm-1, which have been observed in normal breast tissues before. It was shown that Raman bands of the average LN spectrum of the II group associated with proteins and carbohydrates are more intensive than those of the breast tissues spectrum. The intensity of the Raman spectra collected from the samples of the II group is almost three times higher compared to the I group. The vibrations of carbohydrates and amide III are much more intensive in the II group's case. The Raman spectra of the breast cancer tissues and LNs of the II group's samples do not contain bands (e.g., 1520 cm-1) found in the Raman spectra of the normal breast tissues elsewhere. FTIR spectra of the LNs of the I group's women showed a lower level of vibrations corresponding to functional group building nucleic acid, collagen, carbohydrates, and proteins in comparison with the breast cancer tissues. Pearson's correlation test showed positive and more significant interplay between the nature of the breast tissues and LN spectra obtained for the II group of patients than that in the I group's spectra. Moreover, principal component analysis (PCA) showed that it is possible to distinguish Raman and FTIR spectra of the breast cancer tissues and LNs collected from women without recurrence of the disease.Entities:
Keywords: FTIR; Raman spectroscopy; breast cancer tissues; chemical changes; lymph nodes; recurrence
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Year: 2020 PMID: 32708082 PMCID: PMC7397234 DOI: 10.3390/molecules25143295
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Figure 1Microscopy images of the (1) breast cancer tissues and (2) LNs collected from the (a) I and (b) II groups of patients.
Wavenumbers of the Raman and FTIR peak positions with corresponding vibrations in analyzed samples, where BCI and LNI mean the breast cancer tissues and LNs obtained from the I group, while BCII and LNII mean the breast cancer tissues and LNs obtained from the II group [16,17,18,19,20,21,22,23,24,25,26,27,28,32,33,34].
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| 849 | 848 | 846 | CCH from collagen [ | |
| 872–892 | 891 | 893 | CCH from collagen [ | |
| 945 | C-C glycogen [ | |||
| 986 | 986 | 987 | C-C glycogen [ | |
| 1003 | 1005 | C-C from aromatic ring of phenylalanine [ | ||
| 1029 | PO2− from DNA, RNA and phospholipids [ | |||
| 1042 | 1047 | 1048 | 1050 | C-C glycogen [ |
| 1083 | 1083 | PO2− from DNA, RNA and phospholipids [ | ||
| 1126 | 1126 | 1127 | 1127 | C-N from proteins, C-C from DNA [ |
| 1151 | 1151 | 1150 | 1150 | C-O from carbohydrates [ |
| 1243 | 1243 | 1244 | 1243 | Amide III [ |
| 1348 | 1348 | 1350 | 1350 | CH from lipids and proteins [ |
| 1399 | 1399 | 1399 | 1399 | CH from lipids and proteins [ |
| 1424 | 1424 | 1420 | 1420 | CH2 from lipids [ |
| 1440 | 1440 | 1440 | 1440 | CH2 from lipids, proteins [ |
| 1542 | 1542 | 1541 | 1543 | Amide II [ |
| 1624 | 1624 | Amino acids residues, proteins [ | ||
| 1638 | 1641 | 1637 | 1637 | Amide I, proteins [ |
| 2849 | 2849 | 2847 | 2849 | CH2 from lipids [ |
| 2878 | 2878 | 2878 | 2878 | CH3 from lipids [ |
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| 931 | 922 | 931 | 926 | PO3−2 group from DNA, RNA and phospholipids [ |
| 1078 | 1078 | 1072 | 1078 | C-O group from glycogen [ |
| 1181 | 1181 | 1183 | PO3−2 group from DNA, RNA and phospholipids [ | |
| 1238 | 1238 | 1238 | 1238 | Amide III [ |
| 1377 | 1377 | 1377 | 1377 | CH2 group from protein and lipids [ |
| 1484 | 1484 | 1484 | 1488 | CH2 group from cholesterol [ |
| 1541 | 1539 | 1543 | 1537 | Amide II [ |
| 1639 | 1639 | 1637 | 1637 | Amide I [ |
| 1741 | 1730 | 1732 | 1732 | CO vibrations from lipids [ |
| 2849 | 2848 | 2848 | 2848 | Symmetric stretching vibrations of CH2 [ |
| 2914 | 2915 | 2916 | 2919 | Asymmetric stretching vibrations of CH2 [ |
| 2958 | 2958 | 2955 | 2959 | CH3 asymmetric stretching [ |
Figure 2Average Raman spectra of the breast cancer tissues and LNs collected from patients of the (a) I and (b) II groups. The Raman bands typical for paraffin are marked with asterisks.
Figure 3Average FTIR spectra of the breast cancer tissues and LNs from the (a) I and (b) II groups.
Figure 4Pearson’s correlation test (N = 48) for the (A, C) breast cancer tissues and (B, D) LNs collected from women (A, B) without and (C, D) with the disease recurrence. Data were collected from the (a) Raman and (b) FTIR spectroscopies.
Figure 5PCA of the breast tissues (black color) and LNs (red color) obtained from the (a,g) Raman and (b,h) FTIR spectra of the samples from the I (diamond) and II (dot) groups of patients, with loading plots of Components 1 and 2 of Raman (c,d) and FTIR (e,f). Due to differences in chemical compositions, a two-dimensional (2D) scores plot of the samples is presented through the selected spectral ranges between 800–1800 cm−1. Moreover, PCA analysis obtained for average spectra is presented in figures (a,b), and PCA analysis for all obtained spectra is presented in (g,h).
Description of the samples, where “R” means right breast, “L”—left, “nst”—invasive carcinoma, DCIS (ductal carcinoma in situ)—formation of intraductal carcinoma, “NG”—nuclear grading, “G”—grading, “IM”—mitotic index, i.e., an amount of abnormal mitosis in 10 large fields of view, “ER”—status of the estrogen receptor ER (evaluated on one plus, two pluses and three pluses), “PR”—status of the progesterone receptor PR (evaluated on one plus, two pluses and three pluses), “HER”—status of HER-2 receptor (evaluated on one plus, two pluses and three pluses), only three pluses is a positive reaction, in “ypTNM” “y” means treatment, “p”—pathological evaluation, “T”—tumour size, “N”—state of the LN, “M”—information about the spread.
| No | A Year of Birth | Breast | Type of Cancer | DCIS | NG | G | IM | ER | PR | HER | Type of Surgery | Tumor Size before Treatment [cm] | ypTNM | Treatment | Answer | Recurrence |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23--3 | 1960 | L | NST | 0 | 3 | 3 | 11 | (+++) | (+++) | (+) | amputation | 2.5 | ypT1cN2a | CT, RT | partial small | Without evidence of failure |
| 25--3 | 1962 | R | NST | 1 | 2 | 2 | 7 | (++) | (+++) | (+) | amputation | 2.3 × 1.9 × 1.9 | ypT1cN1a | CT, RT | partial small | Without evidence of failure |
| 21--3 | 1949 | L | NST | 0 | 2 | 2 | 5 | (+) | (+++) | (+) | amputation | 3.6 | ypT2N1a | CT, RT | partial small | Without evidence of failure |
| 10--3 | 1954 | L | NST | 0 | 3 | 3 | 43 | (−) | (−) | (−) | amputation | 4.0 | ypT2N1a | CT, RT | partial | Without evidence of failure |
| 5--3 | 1950 | R | NST | 1 | 3 | 3 | 15 | (++) po CT | (+) po CT | (+) po Ct | amputation | 1.1 | ypT1aN1a | CT, RT | partial large | Spread to the brain, DCIS in the second breast |
| 14--3 | 1970 | L | NST | 1 | 1 | 1 | 0 | (−) | (+) | (+++) | amputation | 3.0 | ypT1cN1a | CT, RT | partial large | Spread to the lymph nodes |
| 20--3 | 1952 | L | NST | 0 | 2 | 2 | 5 | (−) | (−) | (+) | amputation | 5.5 | ypT2N3a | CT, RT | partial small | Spread to the lymph nodes and recurence |
| 22--3 | 1937 | L | NST | 0 | 2 | 2 | 4 | (+) | (+) | (−) | amputation | 4.0 | ypT2N3a | CT, RT | partial small | Endometrial cancer, spread to bone, lung, local recurrence |