Literature DB >> 3270538

The space structure of a conformationally labile oligopeptide in solution: angiotensin.

G V Nikiforovich1, B Vesterman, J Betins, L Podins.   

Abstract

The paper describes a new approach to the problem of space structure description for conformationally labile molecules existing in solution as a set of different conformers in dynamic equilibrium. In such a case the "average" model derived exclusively from physico-chemical data represents a virtual structure devoid of physical sense. The proposed approach involves the selection of statistical weights wi for molecular conformers in solution by combined use of spectroscopic data and energy calculations (including the Monte-Carlo technique). Consequently, it appears possible to confine the entire region of all wi values only by those points (wi) that provide a reasonable agreement between the results of calculations and the experimental data. The approach was put to trial by using the linear octapeptide angiotensin, a well-known bioregulator with a wide spectrum of action. The 1H NMR and fluorescence spectroscopy were used as a source of experimental evidence concerning the space structure of the peptide in aqueous solution. The spin-lattice relaxation rates induced by the spin label allowed to estimate simultaneously several parameters characterizing the distance between the spin label and different functional groups in the angiotensin molecule. At least 5 types of angiotensin conformers were shown to be "indispensable" to achieve a good agreement between the results of energy calculations and 1H NMR spectroscopy data obtained in solution. The statistical weight estimates for angiotensin conformers permit to predict, with a high degree of accuracy, the value of singlet-singlet energy transfer between the Phe and Tyr aromatic chromophores of the molecule in aqueous solution. The proposed approach to the description of conformationally labile molecules can be actually regarded as stepwise refinement of statistical weight limits for sets of low-energy conformers in solution upon accumulation of new experimental evidence. The same appears to apply to conformationally labile molecules of non-peptide nature.

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Year:  1987        PMID: 3270538     DOI: 10.1080/07391102.1987.10507702

Source DB:  PubMed          Journal:  J Biomol Struct Dyn        ISSN: 0739-1102


  3 in total

1.  Computer simulation of the conformational behaviour of angiotensinogen (6-13) renin substrate.

Authors:  M Benkoulouche; M Cotrait; B Maigret
Journal:  J Comput Aided Mol Des       Date:  1992-02       Impact factor: 3.686

Review 2.  Recent Developments in Data-Assisted Modeling of Flexible Proteins.

Authors:  Cezary Czaplewski; Zhou Gong; Emilia A Lubecka; Kai Xue; Chun Tang; Adam Liwo
Journal:  Front Mol Biosci       Date:  2021-12-24

3.  Angiotensin II plasma levels are linked to disease severity and predict fatal outcomes in H7N9-infected patients.

Authors:  Fengming Huang; Jing Guo; Zhen Zou; Jun Liu; Bin Cao; Shuyang Zhang; Hui Li; Wei Wang; Miaomiao Sheng; Song Liu; Jingcao Pan; Changjun Bao; Mei Zeng; Haixia Xiao; Guirong Qian; Xinjun Hu; Yuanting Chen; Yu Chen; Yan Zhao; Qiang Liu; Huandi Zhou; Jindong Zhu; Hainv Gao; Shigui Yang; Xiaoli Liu; Shufa Zheng; Jiezuan Yang; Hongyan Diao; Hongcui Cao; Ying Wu; Min Zhao; Shuguang Tan; Dan Guo; Xiliang Zhao; Yicong Ye; Wei Wu; Yingchun Xu; Josef M Penninger; Dangsheng Li; George F Gao; Chengyu Jiang; Lanjuan Li
Journal:  Nat Commun       Date:  2014-05-06       Impact factor: 14.919

  3 in total

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