| Literature DB >> 32699290 |
Nobuyuki Kobayashi1,2, Shunichiro Shinagawa3, Hidehito Niimura4, Hisashi Kida4, Tomoyuki Nagata3, Kenji Tagai3, Kazuya Shimada5, Naomi Oka5, Ryo Shikimoto4, Yoshihiro Noda4, Shinichiro Nakajima4, Masaru Mimura4, Masahiro Shigeta3, Kazuhiro Kondo5.
Abstract
Early diagnosis of dementia including Alzheimer's disease (AD) is an urgent medical and welfare issue. However, to date, no simple biometrics have been available. We reported that blood DNA methylation levels of the COASY gene, which encodes coenzyme A synthase, were increased in individuals with AD and amnestic mild cognitive impairment (aMCI). The present study sought to replicate these findings with larger numbers of samples. Another objective was to clarify whether COASY methylation is associated with neurodegeneration through a comparison of AD, AD with cardiovascular disease (CVD), and vascular dementia (VaD). We measured blood COASY methylation levels in normal controls (NCs) (n = 200), and individuals with aMCI (n = 22), AD (n = 151), and VaD (n = 21). Compared with NCs, they were significantly higher in individuals with aMCI and AD. Further, they were significantly higher in AD patients without cardiovascular diseases compared to AD patients with them. These findings suggest that COASY methylation levels may be related to neurodegeneration in AD.Entities:
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Year: 2020 PMID: 32699290 PMCID: PMC7376092 DOI: 10.1038/s41598-020-69248-9
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Figure 1PCR amplification region. This shows the PCR amplification sequences of the bisulfited human COASY region (A) and the bisulfited mouse COASY region (B). The gray areas indicate the loci of primers.
Figure 2Aligned melt curves and calibration curve. This shows aligned melt curves (A) and the calibration curve (B) used in MS-HRM analysis for bisulfited DNA. 100%, 75%, 50% 25%, 5% and 0% (control) bisulfited DNA are indicated with red, orange, yellow, green, light blue and blue lines, respectively.
Participants characteristics.
| NC | aMCI | AD | VaD | ||
|---|---|---|---|---|---|
| 200 | 22 | 151 | 21 | ||
| Age (years) mean ± SEM (min–max) | 76.6 ± 0.3 (66–86) | 78.7 ± 0.5 (76–83) | 81.1 ± 0.5 (59–90) | 81.9 ± 1.7 (59–89) | < 0.0001 |
| Female: male (%) | 60.0: 40.0 | 59.1: 40.9 | 72.2: 27.8 | 38.1: 61.9 | 0.007 |
| Duration of disease (years) mean ± S.E.M. (min–max) | – | 1.68 ± 0.30 (0.33–6.00) | 2.99 ± 0.17 (0.08–10.0) | 2.10 ± 0.61 (0.08–11.0) | – |
| Age at onset (years) mean ± S.E.M. (min–max) | – | 76.9 ± 0.6 (70–82) | 77.9 ± 0.6 (53–89) | 79.4 ± 1.7 (58–88) | – |
| Education (years) mean ± S.E.M. (min–max) | 12.0 ± 0.2 (2–22) | 11.6 ± 0.7 (6–16) | 10.9 ± 0.2 (0–21) | 9.5 ± 0.5 (6–14) | < 0.0001 |
| MMSE score mean ± S.E.M. (min–max) | 27.9 ± 0.1 (22–30) | 26.5 ± 0.4 (23–30) | 17.3 ± 0.5 (0–28) | 9.8 ± 1.7 (0–26) | < 0.0001 |
| 0 (0.00) | 1 (4.55) | 0 (0.00) | 0 (0.00) | – | |
| 12 (6.00) | 1 (4.55) | 7 (4.64) | 3 (14.3) | – | |
| 4 (2.00) | 0 (0.00) | 2 (1.32) | 0 (0.00) | – | |
| 151 (75.5) | 11 (50.0) | 71 (47.0) | 14 (66.7) | – | |
| 33 (16.5) | 9 (40.9) | 58 (38.4) | 4 (19.0) | – | |
| 0 (0.00) | 0 (0.00) | 13 (8.61) | 0 (0.00) | – | |
| 8.00 | 9.09 | 5.96 | 14.3 | 0.567 | |
| 94.0 | 90.9 | 86.8 | 85.7 | 0.115 | |
| 18.5 | 40.9 | 48.3 | 19.0 | < 0.0001 |
Age, education and MMSE scores were analyzed by the Kruskal–Wallis test. Sex ratio and APOE alleles carrier frequencies were analyzed using the chi-squared test.
Figure 3Blood COASY DNA methylation levels in dementia patients. This shows blood COASY DNA methylation levels in the dementia patients overall (A), females only (B), and males only (C). Red circles indicate females and blue circles males. Horizontal lines indicate medians and error bars interquartile range. *P < 0.05, ***P < 0.001, ****P < 0.0001. Dunn–Bonferroni correction.
Associations between individual background characteristics and COASY promoter region DNA methylation levels in dementia patients.
| NC ( | MCI ( | AD ( | VaD ( | |||||
|---|---|---|---|---|---|---|---|---|
| Age (years) | − 0.10 | 0.18 | 0.17 | 0.45 | − 0.14 | 0.08 | 0.08 | 0.74 |
| Sex | – | 0.01 | – | 0.29 | – | 0.00 | – | 0.92 |
| Duration of disease (years) | – | – | 0.09 | 0.70 | − 0.07 | 0.43 | − 0.36 | 0.11 |
| Age at onset (years) | – | – | 0.14 | 0.53 | − 0.10 | 0.25 | 0.20 | 0.39 |
| Education (years) | − 0.07 | 0.32 | − 0.18 | 0.43 | 0.10 | 0.24 | 0.16 | 0.49 |
| MMSE score | 0.04 | 0.56 | − 0.30 | 0.18 | 0.37 | 0.00 | 0.27 | 0.30 |
| – | 0.45 | – | 0.70 | – | 0.44 | – | 0.32 | |
Associations were examined by Spearman’s rank correlation coefficients, except for sex and APOE ε4 carrier. The parameters were compared using the Mann–Whitney U test.
Multiple linear regression analysis on COASY DNA methylation levels in AD.
| Variables | S.E.M | ||
|---|---|---|---|
| Age | − 0.12 | 0.16 | 0.44 |
| MMSE | 0.99 | 0.18 | < 0.0001 |
| Sex | 11.01 | 2.31 | < 0.0001 |
R = 0.296, analysis of variance (ANOVA) P < 0.0001.
Figure 4ROC curve for diagnosis in aMCI and AD. This shows the potential sensitivity and specificity of diagnosis for aMCI, AD and all (A), females only (B), and males only (C) using COASY DNA methylation levels.
Figure 5COASY promoter region DNA methylation levels in AD without CVD, AD with CVD, and VaD. This shows blood COASY DNA methylation levels in AD without CVD, AD with CVD, and VaD. Horizontal lines indicate medians and error bars interquartile range. ***P < 0.001. ****P < 0.0001. Dunn–Bonferroni correction.