Literature DB >> 32696375

Determining the Protective Activity of IDPs Under Partial Dehydration and Freeze-Thaw Conditions.

David F Rendón-Luna1, Paulette S Romero-Pérez1, Cesar L Cuevas-Velazquez1,2, José L Reyes1, Alejandra A Covarrubias3.   

Abstract

Unlike for structured proteins, the study of intrinsically disordered proteins (IDPs) requires selection of ad hoc assays and strategies to characterize their dynamic structure and function. Late embryogenesis abundant (LEA) proteins are important plant IDPs closely related to water-deficit stress response. Diverse hypothetical functions have been proposed for LEA proteins, such as membrane stabilizers during cold stress, oxidative regulators acting as ion metal binding molecules, and protein protectants during dehydration and cold/freezing conditions. Here we present two detailed protocols to characterize IDPs with potential protein/enzyme protection activity under partial dehydration and freeze-thaw treatments.

Entities:  

Keywords:  Alcohol dehydrogenase; Dehydration; Desiccation; Intrinsically disordered proteins; LEA proteins; Lactate dehydrogenase; Late embryogenesis abundant proteins

Mesh:

Substances:

Year:  2020        PMID: 32696375     DOI: 10.1007/978-1-0716-0524-0_26

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  20 in total

1.  Why are "natively unfolded" proteins unstructured under physiologic conditions?

Authors:  V N Uversky; J R Gillespie; A L Fink
Journal:  Proteins       Date:  2000-11-15

2.  Dehydration-induced expression of LEA proteins in an anhydrobiotic chironomid.

Authors:  Takahiro Kikawada; Yuichi Nakahara; Yasushi Kanamori; Ken-ichi Iwata; Masahiko Watanabe; Brian McGee; Alan Tunnacliffe; Takashi Okuda
Journal:  Biochem Biophys Res Commun       Date:  2006-07-12       Impact factor: 3.575

Review 3.  The enigmatic LEA proteins and other hydrophilins.

Authors:  Marina Battaglia; Yadira Olvera-Carrillo; Alejandro Garciarrubio; Francisco Campos; Alejandra A Covarrubias
Journal:  Plant Physiol       Date:  2008-09       Impact factor: 8.340

Review 4.  Structural disorder in plant proteins: where plasticity meets sessility.

Authors:  Alejandra A Covarrubias; Cesar L Cuevas-Velazquez; Paulette S Romero-Pérez; David F Rendón-Luna; Caspar C C Chater
Journal:  Cell Mol Life Sci       Date:  2017-06-22       Impact factor: 9.261

Review 5.  Intrinsically disordered proteins in crowded milieu: when chaos prevails within the cellular gumbo.

Authors:  Alexander V Fonin; April L Darling; Irina M Kuznetsova; Konstantin K Turoverov; Vladimir N Uversky
Journal:  Cell Mol Life Sci       Date:  2018-07-31       Impact factor: 9.261

6.  Highly hydrophilic proteins in prokaryotes and eukaryotes are common during conditions of water deficit.

Authors:  A Garay-Arroyo; J M Colmenero-Flores; A Garciarrubio; A A Covarrubias
Journal:  J Biol Chem       Date:  2000-02-25       Impact factor: 5.157

7.  Phase separation in biology.

Authors:  Simon Alberti
Journal:  Curr Biol       Date:  2017-10-23       Impact factor: 10.834

8.  ZmLEA3, a multifunctional group 3 LEA protein from maize (Zea mays L.), is involved in biotic and abiotic stresses.

Authors:  Yang Liu; Li Wang; Xin Xing; Liping Sun; Jiaowen Pan; Xiangpei Kong; Maoying Zhang; Dequan Li
Journal:  Plant Cell Physiol       Date:  2013-03-29       Impact factor: 4.927

Review 9.  Intrinsically unstructured proteins and their functions.

Authors:  H Jane Dyson; Peter E Wright
Journal:  Nat Rev Mol Cell Biol       Date:  2005-03       Impact factor: 94.444

10.  Tardigrades Use Intrinsically Disordered Proteins to Survive Desiccation.

Authors:  Thomas C Boothby; Hugo Tapia; Alexandra H Brozena; Samantha Piszkiewicz; Austin E Smith; Ilaria Giovannini; Lorena Rebecchi; Gary J Pielak; Doug Koshland; Bob Goldstein
Journal:  Mol Cell       Date:  2017-03-16       Impact factor: 17.970

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  1 in total

Review 1.  A Trajectory of Discovery: Metabolic Regulation by the Conditionally Disordered Chloroplast Protein, CP12.

Authors:  Cassy Gérard; Frédéric Carrière; Véronique Receveur-Bréchot; Hélène Launay; Brigitte Gontero
Journal:  Biomolecules       Date:  2022-07-28
  1 in total

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