Literature DB >> 32696355

Exploring Protein Intrinsic Disorder with MobiDB.

Alexander Miguel Monzon1, András Hatos1, Marco Necci1, Damiano Piovesan1, Silvio C E Tosatto2,3.   

Abstract

Nowadays, it is well established that many proteins or regions under physiological conditions lack a fixed three-dimensional structure and are intrinsically disordered. MobiDB is the main repository of protein disorder and mobility annotations, combining different data sources to provide an exhaustive overview of intrinsic disorder. MobiDB includes curated annotations from other databases, indirect disorder evidence from structural data, and disorder predictions from protein sequences. It provides an easy-to-use web server to visualize and explore disorder information. This chapter describes the data available in MobiDB, emphasizing how to use and access the intrinsic disorder data. MobiDB is available at URL http://mobidb.bio.unipd.it .

Entities:  

Keywords:  Database; Disorder annotation; Disorder prediction; IDP; IDR; Intrinsic disorder; Intrinsically disordered proteins; Intrinsically disordered regions; MobiDB; Structural flexibility

Mesh:

Substances:

Year:  2020        PMID: 32696355     DOI: 10.1007/978-1-0716-0524-0_6

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  65 in total

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  1 in total

1.  Discovering molecular features of intrinsically disordered regions by using evolution for contrastive learning.

Authors:  Alex X Lu; Amy X Lu; Iva Pritišanac; Taraneh Zarin; Julie D Forman-Kay; Alan M Moses
Journal:  PLoS Comput Biol       Date:  2022-06-29       Impact factor: 4.779

  1 in total

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