Literature DB >> 32692614

The Ingenuity of Bacterial Genomes.

Paul C Kirchberger1, Marian L Schmidt1, Howard Ochman1.   

Abstract

The genomes of bacteria contain fewer genes and substantially less noncoding DNA than those of eukaryotes, and as a result, they have much less raw material to invent new traits. Yet, bacteria are vastly more taxonomically diverse, numerically abundant, and globally successful in colonizing new habitats compared to eukaryotes. Although bacterial genomes are generally considered to be optimized for efficient growth and rapid adaptation, nonadaptive processes have played a major role in shaping the size, contents, and compact organization of bacterial genomes and have allowed the establishment of deleterious traits that serve as the raw materials for genetic innovation.

Keywords:  bacterial evolution; chromosome organization; gene origins; genome dynamics; random genetic drift

Mesh:

Year:  2020        PMID: 32692614     DOI: 10.1146/annurev-micro-020518-115822

Source DB:  PubMed          Journal:  Annu Rev Microbiol        ISSN: 0066-4227            Impact factor:   15.500


  9 in total

1.  Adaptation and genomic erosion in fragmented Pseudomonas aeruginosa populations in the sinuses of people with cystic fibrosis.

Authors:  Catherine R Armbruster; Christopher W Marshall; Arkadiy I Garber; Jeffrey A Melvin; Anna C Zemke; John Moore; Paula F Zamora; Kelvin Li; Ian L Fritz; Christopher D Manko; Madison L Weaver; Jordan R Gaston; Alison Morris; Barbara Methé; William H DePas; Stella E Lee; Vaughn S Cooper; Jennifer M Bomberger
Journal:  Cell Rep       Date:  2021-10-19       Impact factor: 9.423

2.  The Notable Achievements and the Prospects of Bacterial Pathogen Genomics.

Authors:  Grigorios D Amoutzias; Marios Nikolaidis; Andrew Hesketh
Journal:  Microorganisms       Date:  2022-05-17

3.  Prochlorococcus have low global mutation rate and small effective population size.

Authors:  Zhuoyu Chen; Xiaojun Wang; Yu Song; Qinglu Zeng; Yao Zhang; Haiwei Luo
Journal:  Nat Ecol Evol       Date:  2021-12-23       Impact factor: 15.460

Review 4.  Genetic innovations in animal-microbe symbioses.

Authors:  Julie Perreau; Nancy A Moran
Journal:  Nat Rev Genet       Date:  2021-08-13       Impact factor: 59.581

5.  Spotlight on alternative frame coding: Two long overlapping genes in Pseudomonas aeruginosa are translated and under purifying selection.

Authors:  Michaela Kreitmeier; Zachary Ardern; Miriam Abele; Christina Ludwig; Siegfried Scherer; Klaus Neuhaus
Journal:  iScience       Date:  2022-02-01

6.  A Large-Scale Genome-Based Survey of Acidophilic Bacteria Suggests That Genome Streamlining Is an Adaption for Life at Low pH.

Authors:  Diego Cortez; Gonzalo Neira; Carolina González; Eva Vergara; David S Holmes
Journal:  Front Microbiol       Date:  2022-03-21       Impact factor: 5.640

7.  Long-Read-Resolved, Ecosystem-Wide Exploration of Nucleotide and Structural Microdiversity of Lake Bacterioplankton Genomes.

Authors:  Yusuke Okazaki; Shin-Ichi Nakano; Atsushi Toyoda; Hideyuki Tamaki
Journal:  mSystems       Date:  2022-08-08       Impact factor: 7.324

8.  Tandem Repeats in Bacillus: Unique Features and Taxonomic Distribution.

Authors:  Juan A Subirana; Xavier Messeguer
Journal:  Int J Mol Sci       Date:  2021-05-20       Impact factor: 5.923

9.  Quantifying bacterial evolution in the wild: A birthday problem for Campylobacter lineages.

Authors:  Jessica K Calland; Ben Pascoe; Sion C Bayliss; Evangelos Mourkas; Elvire Berthenet; Harry A Thorpe; Matthew D Hitchings; Edward J Feil; Jukka Corander; Martin J Blaser; Daniel Falush; Samuel K Sheppard
Journal:  PLoS Genet       Date:  2021-09-28       Impact factor: 5.917

  9 in total

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