| Literature DB >> 32689897 |
Zhiyan Cao1,2, Kang Zhang2,3, Xiaoyue Guo3, B Gillian Turgeon4, Jingao Dong1,2.
Abstract
The heterothallic ascomycete Setosphaeria turcica (anamorph Exserohilum turcicum) causes northern corn leaf blight, which results in devastating yield losses and a reduction in feed value. Although genome sequences of two model strains of the pathogen are available (https://mycocosm.jgi.doe.gov/mycocosm/home), previous drafts were assembled using short read technologies, making evolutionary and genetic linkage inferences difficult. Here, race 23N of S. turcica strain Et28A was sequenced again using Illumina HiSeq and PacBio Sequel technologies, and assembled to approximately 43,480,261 bp on 30 scaffolds. In all, 13,183 protein-coding genes were predicted, 13,142 of them were well annotated. This S. turcica genome resource is important for understanding the genetics behind pathogen evolution and infection mechanisms.Entities:
Keywords: Setosphaeria turcica; evolution; fungal pathogens; genome sequence; genomics; infection; microbe-genome sequencing
Mesh:
Year: 2020 PMID: 32689897 DOI: 10.1094/PHYTO-06-20-0225-A
Source DB: PubMed Journal: Phytopathology ISSN: 0031-949X Impact factor: 4.025