| Literature DB >> 32682954 |
Steven S Plotkin1, Neil R Cashman2.
Abstract
Amyloid-β (Aβ) and tau proteins currently represent the two most promising targets to treat Alzheimer's disease. The most extensively developed method to treat the pathologic forms of these proteins is through the administration of exogenous antibodies, or passive immunotherapy. In this review, we discuss the molecular-level strategies that researchers are using to design an effective therapeutic antibody, given the challenges in treating this disease. These challenges include selectively targeting a protein that has misfolded or is pathological rather than the more abundant, healthy protein, designing strategic constructs for immunizing an animal to raise an antibody that has the appropriate conformational selectivity to achieve this end, and clearing the pathological protein species before prion-like cell-to-cell spread of misfolded protein has irreparably damaged neurons, without invoking damaging inflammatory responses in the brain that naturally arise when the innate immune system is clearing foreign agents. The various solutions to these problems in current clinical trials will be discussed.Entities:
Mesh:
Substances:
Year: 2020 PMID: 32682954 PMCID: PMC7365083 DOI: 10.1016/j.nbd.2020.105010
Source DB: PubMed Journal: Neurobiol Dis ISSN: 0969-9961 Impact factor: 7.046
Antibodies to Aβ currently in clinical development.
| Antibody | Epitope location | Immunization strategy | Binding Selectivity | Ab species and backbone isotype | Current Status (2019-2020) | Company | Clinical outcomes | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Last completed Trial (Phase) | Patient stage | Reduced brain Ab burden | Slowing of cognitive decline | ARIA-E or ARIA-H | |||||||
| Bapineuzumab (AAB-001, 3D6) | 1–5 | A | M,O,F/P | Humanized IgG1 | Janssen/Pfizer | Mild to moderate AD | + | − | high | ||
| Solanezumab (LY2062430, m266) | 16–26 | A | M++,O,F/P- | Humanized IgG1 | Eli Lilly | Mild to moderate AD | + | +/− | no | ||
| Ponezumab (PF-04360365) | 30–40 | A | M+,O,F (A | Humanized IgG2a | Janssen/Pfizer | Mild to moderate AD | − | − | low ARIA-H, low ARIA-E | ||
| Crenezumab (MABT5102A, RG7412) | 13–24 | liposome-anchored peptides | M-,O, F/P | Humanized IgG4 | Roche/Genentech | Mild to moderate AD | − | − | low | ||
| Gantenerumab (RO4909832, RG1450) | 2–11 and 18–27 | N/A: human combinatorial antibody libraries | M-, O, F/P+ | human IgG1 | Hoffman-La Roche | Prodromal to mild AD | + | − | high: 2/6 patients (200 mg dose) | ||
| Donanemab (N3pG, LY-3002813, mE8) | p3–7 | A | F/P (N3pG) | Humanized IgG1 | Eli Lilly | Early/mild AD | + | n/a | moderate; immunogenic | ||
| Aducanumab (BIIB037) | 3–7 | N/A: B-cell libraries from healthy elderly subjects | M-,O,F/P | Human IgG1 | Neurimmune/Eisai/Biogen | Early AD | + | − | high | ||
| SAR-228810 (SAR255952, 13C3) | N-terminus (4–20) | Synthetic oligomers | O,F/P | Humanized IgG4 | Sanofi | Mild to moderate AD | n/a | n/a | no ARIA-E, very low ARIA-H | ||
| BAN-2401 (Lecanemab, mAb158) | N-terminus (1–16) | Protofibrils of E22G mutant A | M-,O+, F/P | Humanized IgG1 | Biogen/Eisai/BioArctic | Mild to moderate AD/Early AD | + | +/− | low | ||
| MEDI-1814 | A | N/A: human combinatorial antibody libraries | M++,O | Human IgG1 | Eli Lilly/AstraZeneca/MedImmune | Mild to moderate AD | n/a | n/a | no | ||
| KHK6640 | Not known/Not disclosed | Not available | O,F/P | Humanized IgG4 | Kyowa Hakko Kirin | Prodromal/Mild/Moderate AD | n/a | − | no ARIA-E, moderate ARIA-H | ||
| Plasma Exchange/Albumen replacement, IVIgs | n/a | Serum of multiple healthy young volunteers | M,O,F/P | n/a | Grifols Biologicals Inc. | Mild to moderate AD | +/− | − | none | ||
| NPT088 | noncontiguous 11−12, 17–25, and 31–40 | N/A: Human IgG -viral g3p GAIM chimera | O,F/P | Human IgG1 | Proclara Biosciences | Mild to moderate AD | n/a | n/a | − | ||
With mutations to reduce effector function.
M,O,F/P = Monomers, Oligomers, fibrils/plaques respectively. Here we assume if the antibody binds fibril, it binds plaque. This is generally the case when experimental measurements exist.
For the mild AD subgroup of 2 pooled studies.
Fig. 1Schematics of energy landscapes of the binding free energy of an epitope to an antibody, as a function of conformational dissimilarity to the bound state structure, which is assumed to be at the lowest point. A conformationally-labile antibody is more prone to induced fit with different alternative conformations of a substrate ligand, and will thus lack binding selectivity (left). A conformationally-selective antibody will be unforgiving to even small conformational differences, which will be costly in terms of binding free energy.
Fig. 2A selection of Aβ fibril structures, illustrating their polymorphism. Species (Aβ40, Aβ42, or the mutant Aβ40(E22Δ)) are indicated for each image, along with the PDB entry: 2M4J (Lu et al. (2013)), 2LMN (Paravastu et al. (2008)), 2MVX (Schütz et al. (2015)), 2MXU (Xiao et al. (2015)), 5OQV (Gremer et al. (2017)), and 2NAO (Wälti et al. (2016)). An example of ionic salt-bridges stabilizing the fibril structure is shown for structure 2M4J (D23-K28) in licorice. Structures 2LMN and 2MXU are incompletely resolved: Residues 1–8 are disordered in 2LMN and residues 1–10 are disordered in 2MXU; These residues are thus missing from the respective solid state NMR structural models. For these structures, the missing amino acids have been added and the structures have been equilibrated using all-atom equilibrium molecular dynamics. Consistent with the solid-state NMR data, these peptide regions remain disordered when molecular dynamics is implemented for these structures. For other structures such as 2M4J and 2NAO, these N-terminal peptide regions remain structured and are largely β-sheet.
Fig. 3Epitope locations on the primary sequence of Aβ, for antibodies currently or recently in clinical trials. Black bars indicate epitope locations; gray bars indicate presumptive epitopes that likely subsume the actual epitope as a subset of the gray region. Gradient filling for MEDI-1814 represents the incompletely characterized epitope, but with known Aβ42 selectivity. Gantenerumab and NPT088 both have discontiguous epitopes on Aβ. Magenta region on the epitope for donanemab represents pyroglutamate at amino acid position 3. Amino acids in the primary sequence of Aβ are colored as follows. Red: negatively charged; Blue: positively charged; Green: aromatic; Yellow background: hydrophobic. The significant hydrophobicity and absence of aromatic residues in the C-terminal region is noteworthy. Specific epitope locations are listed in Table 1. (For interpretation of the references to colour in this figure legend, the reader is referred to the web version of this article.)
Fig. 4Antigen-binding regions of antibodies to Aβ in clinical development, with published co-crystal structures to their epitopes. Antibodies, Protein Databank entry, and epitopes are, from top left to right: aducanumab (PDB 6CO3, structured epitope amino acids 2-7) bapineuzumab (PDB 4HIX, structured epitope aa1-6) crenezumab (PDB 5VZY, structured epitope aa13-24), gantenerumab (PDB 5CSZ, structured epitope aa1-10), ponezumab (PDB 3U0T, structured epitope aa30-40.) solanezumab (PDB 4XXD, structured epitope aa16-26). Interacting aromatic rings are rendered in magenta for visualization. (For interpretation of the references to colour in this figure legend, the reader is referred to the web version of this article.)
Antibodies to tau currently in clinical development.
| Antibody | Epitope location | Immunization strategy | Binding Selectivity | Ab species and backbone isotype | Current Status (2019–2020) | Company | Clinical outcomes | ||
|---|---|---|---|---|---|---|---|---|---|
| Last completed Trial (Disease,Phase) | Patient stage | Reduced tau burden | |||||||
| Gosuranemab, BIIB092, BMS-986168, IPN007/IPN002) | 15–24 | In vitro aggregated full-length tau | M, NFT?, eTau | humanized IgG4 | iPerian/Bristol-Meyers Squibb/Biogen | MCI/Mild AD | + | ||
| ABBV-8E12 (C2N-8E12, HJ8.5) | 25–30 (within 22–34) | recombinant full-length tau | M, NFT, eTau | humanized IgG4 | C2N Diagnostics/Abbvie | Early AD | + | ||
| Zagotenemab (LY3303560, MC-1 IgG1) | 7–9/312–322 (discontiguous) | Immunopurified PHFs | M-,O,NFT | humanized IgG4 | Eli Lilly | healthy, mild to moderate AD | – | ||
| Semorinemab (RO7105705, MTAU9937A, RG6100) | 2–24 (C-terminal portion) | recombinant oligomers | M,NFT,eTau | humanized IgG4 | AC Immune, Genentech, Hoffmann-La Roche | Mild to moderate AD | + | ||
| BIIB076 (NI-105.6C5 huIgG1 | probably 125−131 | N/A: B-cells from healthy subjects | M, PFF, NFT | human IgG1 | Biogen/Neurimmune | Healthy/MCI AD | + | ||
| RG7345 (RO6926496) | 416–430 (pS422) | 416–430 (pS422) peptide | phospho M, PHF | humanized IgG1 or IgG4 | Hoffmann-La Roche | healthy males | − | ||
| UCB0107 (D IgG4) | 235–246 | Recombinant tau fibrils | M,O,PHF | humanized IgG4 or IgG1 | UCB Biopharma | Healthy males, healthy m/f | − | ||
| JNJ-63733657 (B296, PT3) | 204–225 (pT212/pT217) | PHF from AD patients | M,PHF (ptau) | humanized, likely IgG1 | Janssen | healthy m/f | + | ||
| NPT088 | -- | N/A: Human IgG -viral g3p GAIM chimera | O,F/P | Human IgG1 | Proclara Biosciences | Mild to moderate AD | − | ||
M = Monomers, O=Oligomers, NFT = Neurofibrillary tangles, eTau = extracellular tau, PFF = pre-formed fibrils, PHF = paired-helical filaments.
in cynomolgus monkeys.
indicates “not reported”.
d = Discontinued.
Fig. 5Epitope locations on the primary sequence of tau, for antibodies currently in clinical trials. Black bars indicate epitope locations; Pink bands on epitopes indicate phosphorylated sites and thus selectivity to the phosphorylated species. Domain structural features are shown for the longest isoform of tau (2N4R, 441 aa). The 2N4R isoform contains two N-terminal domains (N1 and N2 of 29 aa each), two proline-rich domains (P1 and P2 of 46 aa each), and four microtubule-binding domains (R1-R4 of 31 aa each). Zagotenemab has a discontiguous epitope. Specific epitope locations are listed in Table 2. (For interpretation of the references to colour in this figure legend, the reader is referred to the web version of this article.)
Fig. 6Co-crystal structures of the antigen-binding regions of two preclinical antibodies to tau, bound to their epitopes. Antibodies, Protein Databank entry, and epitopes are: (left) DC8E8, PDB 5MO3, structured epitope amino acids 298–305; (right) AT8, PDB 5E2W, structured epitope amino acids 202-209.