Literature DB >> 3267767

Metabolic control theory: a structural approach.

C Reder1.   

Abstract

In the general framework of metabolic control theory, we describe a method of mathematical modelling that provides a way of analysing the sensitivity of a metabolic system to perturbations of the environment or of the internal state of this system. The method can be applied to any metabolic system, involving for instance conservation relationships, non-specific external parameters, etc., and leads in particular to a characterization of the control matrices and to a generalization of the summation and connectivity theorems. In this paper, we emphasize the structural characterizations and properties of the systems which depend only on the structure of the metabolic network, and not on the reaction kinetics. The advantage of this approach lies of course in the fact that the structure of the metabolic network is an invariant of the system which depends neither on the environment nor on the internal state of this system. The aim of this paper is to show the efficiency of such a structural approach.

Mesh:

Year:  1988        PMID: 3267767     DOI: 10.1016/s0022-5193(88)80073-0

Source DB:  PubMed          Journal:  J Theor Biol        ISSN: 0022-5193            Impact factor:   2.691


  89 in total

1.  Tissue variation in the control of oxidative phosphorylation: implication for mitochondrial diseases.

Authors:  R Rossignol; T Letellier; M Malgat; C Rocher; J P Mazat
Journal:  Biochem J       Date:  2000-04-01       Impact factor: 3.857

2.  Product dependence and bifunctionality compromise the ultrasensitivity of signal transduction cascades.

Authors:  Fernando Ortega; Luis Acerenza; Hans V Westerhoff; Francesc Mas; Marta Cascante
Journal:  Proc Natl Acad Sci U S A       Date:  2002-02-05       Impact factor: 11.205

3.  Control of the threonine-synthesis pathway in Escherichia coli: a theoretical and experimental approach.

Authors:  C Chassagnole; D A Fell; B Raïs; B Kudla; J P Mazat
Journal:  Biochem J       Date:  2001-06-01       Impact factor: 3.857

Review 4.  Mitochondrial threshold effects.

Authors:  Rodrigue Rossignol; Benjamin Faustin; Christophe Rocher; Monique Malgat; Jean-Pierre Mazat; Thierry Letellier
Journal:  Biochem J       Date:  2003-03-15       Impact factor: 3.857

5.  Elasticity analysis and design for large metabolic responses produced by changes in enzyme activities.

Authors:  Fernando Ortega; Luis Acerenza
Journal:  Biochem J       Date:  2002-10-01       Impact factor: 3.857

Review 6.  Metabolic control analysis: a survey of its theoretical and experimental development.

Authors:  D A Fell
Journal:  Biochem J       Date:  1992-09-01       Impact factor: 3.857

7.  Metabolic control analysis using transient metabolite concentrations. Determination of metabolite concentration control coefficients.

Authors:  J Delgado; J C Liao
Journal:  Biochem J       Date:  1992-08-01       Impact factor: 3.857

8.  Metabolic control analysis under uncertainty: framework development and case studies.

Authors:  Liqing Wang; Inanç Birol; Vassily Hatzimanikatis
Journal:  Biophys J       Date:  2004-10-01       Impact factor: 4.033

9.  Systems Biology Markup Language (SBML) Level 2 Version 5: Structures and Facilities for Model Definitions.

Authors:  Michael Hucka; Frank T Bergmann; Andreas Dräger; Stefan Hoops; Sarah M Keating; Nicolas Le Novère; Chris J Myers; Brett G Olivier; Sven Sahle; James C Schaff; Lucian P Smith; Dagmar Waltemath; Darren J Wilkinson
Journal:  J Integr Bioinform       Date:  2015-09-04

Review 10.  Mitochondria, OxPhos, and neurodegeneration: cells are not just running out of gas.

Authors:  Estela Area-Gomez; Cristina Guardia-Laguarta; Eric A Schon; Serge Przedborski
Journal:  J Clin Invest       Date:  2019-01-02       Impact factor: 14.808

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