| Literature DB >> 32676406 |
Kun Zhu1,2,3, Haifeng Song1,2,3, Zhenan Zhang1,2,3, Binglei Ma1,2,3, Xiaoyuan Bao4, Qian Zhang1,2,3, Jie Jin1,2,3.
Abstract
BACKGROUND: To analyze the incidence and risk factors of acute kidney injury (AKI) after partial nephrectomy (PN) in patients with solitary kidney, and to build AKI prediction models using logistic regression and machine learning (ML) approaches.Entities:
Keywords: Acute kidney injury (AKI); machine learning (ML); partial nephrectomy (PN); prediction model; solitary kidney
Year: 2020 PMID: 32676406 PMCID: PMC7354300 DOI: 10.21037/tau.2020.03.45
Source DB: PubMed Journal: Transl Androl Urol ISSN: 2223-4683
Patients and tumor characteristics, association between AKI and modifiable factors in single factor analysis
| Factors | Overall (n=87) | AKI (n=52) | No AKI (n=35) | P value |
|---|---|---|---|---|
| Baseline characteristics | ||||
| Age (years) | 59.69±10.19 | 61.33±9.08 | 57.26±11.34 | 0.081 |
| Male | 66 (75.90%) | 41 (78.80%) | 25 (71.40%) | 0.428 |
| Female | 21 (24.10%) | 11 (21.2%) | 10 (28.6%) | 0.428 |
| BMI (kg/m2) | 24.02 (22.86, 26.08) | 24.02 (23.05, 26.53) | 24.00 (22.66, 26.05) | 0.690 |
| Tobacco use | 24 (27.60%) | 15 (28.80%) | 9 (25.70%) | 0.749 |
| Alcohol use | 21 (24.10%) | 13 (25.00%) | 8 (22.90%) | 0.819 |
| Preoperative factors | ||||
| Hypertension | 36 (41.40%) | 22 (42.30%) | 14 (40.00%) | 0.830 |
| MAP (mmHg) | 97.25±10.09 | 98.40±8.99 | 95.53±11.45 | 0.195 |
| Diabetes | 13 (14.90%) | 8 (15.40%) | 5 (14.30%) | 0.888 |
| FBG (mmol/L) | 5.42±1.07 | 5.57±1.15 | 5.18±0.92 | 0.092 |
| CKD | 26 (34.20%) | 14 (32.60%) | 12 (34.29%) | 0.729 |
| SCr (μmol/L) | 102.13 (88.00, 116.00) | 103.16 (91.67, 115.49) | 101.87 (84.74, 116.26) | 0.559 |
| eGFR (mL/min/1.73 m2) | 64.77±16.11 | 65.03±17.92 | 64.42±13.65 | 0.872 |
| Hb (g/L) | 140.31±18.83 | 136.87±20.37 | 145.42±15.14 | 0.037* |
| ALB (g/L) | 42.49±4.22 | 41.81±4.40 | 43.50±3.78 | 0.066 |
| K+ (mmol/L) | 4.00±0.36 | 4.00±0.38 | 4.01±0.32 | 0.868 |
| BUN (mmol/L) | 6.41 (5.35,7.76) | 6.66 (5.35,7.77) | 6.07 (5.26,7.68) | 0.542 |
| Tumor maximum diameter (cm) | 3.04 (2.02, 4.43) | 2.72 (1.84, 3.70) | 3.50 (2.20, 5.21) | 0.017* |
| R.E.N.A.L score | 7.00 (6.00, 9.00) | 7.00 (6.00, 8.00) | 8.00 (6.00, 9.00) | 0.024* |
| CCI | 3.00 (1.00, 4.00) | 3.00 (1.00, 4.00) | 3.00 (1.00, 4.00) | 0.892 |
| Intraoperative factors | ||||
| Surgical approach | ||||
| Open | 50 (57.50%) | 36 (69.20%) | 14 (40.00%) | 0.007* |
| Laparoscopic | 37 (42.50%) | 16 (30.80%) | 21 (60.00%) | |
| Clamping | 79 (90.80%) | 49 (94.23%) | 30 (85.71%) | 0.178 |
| Off clamping | 8 (9.20%) | 3 (5.77%) | 5 (14.29%) | |
| Surgery time (min) | 115.00 (82.00, 162.00) | 150.00 (105.50, 178.50) | 100.00 (58.00, 122.00) | <0.001* |
| Ischemia time (min) | 20.00 (15.00, 28.00) | 21.50 (15.50, 31.75) | 15.00 (10.00, 20.00) | <0.001* |
| Type of ischemia | ||||
| Warm | 39 (49.37%) | 22 (44.90%) | 17 (56.67%) | 0.310 |
| Cold | 40 (50.63%) | 27 (55.10%) | 13 (43.33%) | |
| Warm ischemia time (min) | 19 (15, 27) | 23 (18, 36) | 15 (13, 19) | 0.003* |
| Cold ischemia time (min) | 20 (15, 29) | 21 (20, 32) | 18 (13, 23) | 0.045* |
| Intraoperative fluid | ||||
| Crystalloid (mL) | 1600.00 (1125.00, 1825.00) | 1622.50 (1225.00, 1837.50) | 1425.00 (1100.00, 1825.00) | 0.135 |
| Colloid (mL) | 0.00 (0.00, 500.00) | 0.00 (0.00, 500.00) | 0.00 (0.00, 0.00) | 0.049* |
| Total fluid (mL) | 1700.00 (1225.00, 2200.00) | 1737.50 (1500.00, 2243.75) | 1600.00 (1100.00, 2200.00) | 0.050 |
| Units transfused (mL) | 0.00 (0.00, 0.00) | 0.00 (0.00, 0.00) | 0.00 (0.00, 0.00) | 0.108 |
| Mannitol (mL) | 100.00 (0.00, 125.00) | 100.00 (0.00, 125.00) | 0.00 (0.00, 125.00) | 0.143 |
| Pathological tumor stage | ||||
| T1,T2 | 73 (83.91%) | 44 (84.62%) | 29 (82.86%) | 0.380† |
| T3,T4 | 5 (5.75%) | 4 (7.70%) | 1 (2.86%) | |
| Benign | 9 (10.24%) | 4 (7.70%) | 5 (14.29%) | 0.322‡ |
| Multifocality | 19 (21.80%) | 14 (26.90%) | 5 (14.30%) | 0.162 |
| Post-operation RRT | 4 (4.60%) | 4 (7.70%) | 0 | 0.093 |
| Hospital stays (d) | 10.00 (7.00, 13.00) | 11.00 (8.00, 16.00) | 7.00 (6.00, 9.00) | <0.001* |
| Admission to ICU | 19 (21.84%) | 18 (34.62%) | 1 (2.86%) | <0.001* |
| ICU stays (d) | 0.00 (0.00, 0.00) | 0.00 (0.00, 1.00) | 0.00 (0.00, 0.00) | 0.001* |
Continuous variables are presented as medians with quartiles or means with standard deviation. Frequencies with proportions are displayed for categorical variables. The number in parenthesis represents the number of patients with available data. *P<0.05; †represented comparison pathological T1,T2 with T3,T4 malignant tumor; ‡represented comparison malignant with benign tumor. AKI, acute kidney injury; BMI, body mass index; MAP, mean arterial pressure; FBG, fasted blood glucose; CKD, chronic kidney disease; SCr, serum creatinine; eGFR, estimated glomerular function rate; Hb, hemoglobin; ALB, albumin; BUN, blood urea nitrogen; CCI, Charlson comorbidity index; RRT, renal replacement therapy; ICU, intensive care unit.
Subgroup analysis of CKD group
| Factors | Overall (n=26) | AKI (n=14) | No AKI (n=12) | P value |
|---|---|---|---|---|
| Baseline characteristics | ||||
| Age (years) | 67.46±8.10 | 68.21±7.81 | 66.58±8.70 | 0.619 |
| Male | 22 (84.62%) | 13 (92.86%) | 9 (75.00%) | 0.208 |
| Female | 4 (15.38%) | 1 (7.14%) | 3 (25.00%) | |
| BMI (kg/m2) | 23.55 (23.00, 24.95) | 23.38 (22.99, 24.68) | 23.69 (22.93, 25.78) | 0.595 |
| Tobacco use | 8 (30.77%) | 5 (35.71%) | 3 (25.00%) | 0.555 |
| Alcohol use | 4 (15.38%) | 2 (14.29%) | 2 (16.67%) | 0.867 |
| Preoperative factors | ||||
| Hypertension | 13 (50.00%) | 8 (57.14%) | 5 (41.67%) | 0.431 |
| MAP (mmHg) | 95.56±10.12 | 96.43±10.07 | 94.56±10.54 | 0.649 |
| Diabetes | 4 (15.38%) | 3 (21.43%) | 1 (8.33%) | 0.888 |
| FBG (mmol/L) | 5.55±1.39 | 5.66±1.71 | 5.43±0.97 | 0.685 |
| SCr (μmol/L) | 124.50 (113.74, 138.38) | 124.50 (116.26, 147.00) | 120.75 (110.64, 138.61) | 0.432 |
| eGFR (mL/min/1.73 m2) | 47.63±9.96 | 45.39±12.23 | 50.24±5.89 | 0.223 |
| Hb (g/L) | 132.27±17.94 | 123.79±18.28 | 142.17±11.76 | 0.006* |
| ALB (g/L) | 41.05±4.08 | 39.29±4.11 | 43.12±3.05 | 0.014* |
| K+ (mmol/L) | 4.09±0.46 | 4.11±0.54 | 4.07±0.37 | 0.847 |
| BUN (mmol/L) | 7.69 (6.50, 8.60) | 6.66 (5.35, 7.77) | 6.07 (5.26, 7.68) | 0.820 |
| R.E.N.A.L score | 7.00 (6.00, 8.25) | 4.00 (2.00, 6.25) | 5.00 (3.00, 6.75) | 0.095 |
| CCI | 5.00 (3.00, 6.25) | 3.00 (1.00, 4.00) | 3.00 (1.00, 4.00) | 0.347 |
| Intraoperative factors | ||||
| Surgical approach | ||||
| Open | 14 (53.85%) | 11 (78.57%) | 3 (25.00%) | 0.006* |
| Laparoscopic | 12 (46.15%) | 3 (21.43%) | 9 (75.00%) | |
| Surgery time (min) | 112.50 (64.00, 180.25) | 148.25 (102.75, 188.25) | 62.00 (52.50, 115.75) | 0.004* |
| Ischemia time (min) | 20.00 (15.00, 23.25) | 20.50 (19.50, 25.25) | 15.00 (8.50, 21.25) | 0.036* |
| Type of ischemia | ||||
| Warm | 1246.15%) | 6 (42.86%) | 6 (50.00%) | 0.561 |
| Cold | 13 (50.00%) | 8 (57.14%) | 5 (41.67%) | |
| Intraoperative fluid | ||||
| Crystalloid (mL) | 1225.00 (1100.00, 1762.50) | 1412.50 (1225.00, 1762.50) | 1100.00 (912.50, 1925.00) | 0.060 |
| Colloid (mL) | 0.00 (0.00, 0.00) | 0.00 (0.00, 500.00) | 0.00 (0.00, 0.00) | 0.131 |
| Total fluid (mL) | 1600.00 (1100.00, 1812.50) | 1672.50 (1225.00, 1862.50) | 1100.00 (912.50, 1925.00) | 0.060 |
| Units transfused (mL) | 0.00 (0.00, 0.00) | 0.00 (0.00, 0.00) | 0.00 (0.00, 0.00) | 1.000 |
| Mannitol (mL) | 50.00 (0.00, 125.00) | 122.50 (0.00, 125.00) | 0.00 (0.00, 75.00) | 0.060 |
| Tumor maximum diameter (cm) | 3.07 (1.82, 4.02) | 3.41 (1.86, 5.70) | 2.62 (1.66, 3.21) | 0.087 |
| Multifocality | 7 (26.92%) | 4 (28.57%) | 3 (25.00%) | 0.838 |
Continuous variables are presented as medians with quartiles or means with standard deviation. Frequencies with proportions are displayed for categorical variables. The number in parenthesis represents the number of patients with available data. *P<0.05. BMI, body mass index; MAP, mean arterial pressure; FBG, fasted blood glucose; CKD, chronic kidney disease; SCr, serum creatinine; eGFR, estimated glomerular function rate; Hb, hemoglobin; ALB, albumin; BUN, blood urea nitrogen; CCI, Charlson comorbidity index; RRT, renal replacement therapy; ICU, intensive care unit.
Multivariable logistic regression analysis of factors for AKI after PN
| Risk factors | Coefficient | Odds ratio | 95% CI | P value | |
|---|---|---|---|---|---|
| LCI | UCI | ||||
| Ischemia time | 0.092 | 1.096 | 1.031 | 1.165 | 0.003* |
| Surgery time | 0.018 | 1.018 | 1.007 | 1.029 | 0.001* |
| FBG | 0.640 | 1.896 | 1.001 | 3.590 | 0.049* |
Variables with P<0.1 in single factor analysis and those with possible clinical significance were brought into multivariable logistic regression analysis using a cutoff of P value of less than 0.10. The logistic regression analysis was established based on Forward LR. *, P<0.05. AKI, acute kidney injury; PN, partial nephrectomy; FBG, fasted blood glucose; CI, confidence interval; LCI, lower confidence interval; UCI, upper confidence interval.
Figure 1ROC of the logistic regression prediction model. ROC, the receiver operating characteristic curve.
Figure 2Nomogram for the prediction of AKI after PN based on logistic regression model. Instructions: locate the surgery time on the corresponding axis. Draw a line straight upward to the points axis to determine how many points toward the probability of AKI receives for his/her surgery time. Repeat the process for each variable. Add the points for each of variable. Locate the final points on the total points axis. Draw a line straight down to find the patient’s probability of AKI after PN. AKI, acute kidney injury; PN, partial nephrectomy; FBG, fasted blood glucose.
The prediction performance of five machine learning models
| Machine learning | Precision | Recall | F1 | AUC | 95% CI | |
|---|---|---|---|---|---|---|
| Lower limit | Upper limit | |||||
| DT | 0.559 | 0.635 | 0.595 | 0.530 | 0.406 | 0.653 |
| RF | 0.667 | 0.769 | 0.714 | 0.718 | 0.611 | 0.825 |
| LR | 0.692 | 0.692 | 0.692 | 0.615 | 0.493 | 0.736 |
| SVM | 0.660 | 0.673 | 0.667 | 0.559 | 0.433 | 0.685 |
| XGBOOST | 0.772 | 0.846 | 0.807 | 0.749 | 0.648 | 0.851 |
DT, decision tree, RF, random forest, LR, logistic regression, SVM, support vector machines. AUC, area under the receiver operating characteristic; CI, confidence interval.
Figure 3Comparison of area under the receiver operating characteristic curves among the machine learning models. ROC, the receiver operating characteristic curve; SVM, support vector machines; LR, logistic regression; DT, decision trees; RF, random forest.