Literature DB >> 32672961

Transfer Learning for Drug Discovery.

Chenjing Cai1, Shiwei Wang2, Youjun Xu3, Weilin Zhang4, Ke Tang5, Qi Ouyang1,6, Luhua Lai1,3, Jianfeng Pei1.   

Abstract

The data sets available to train models for in silico drug discovery efforts are often small. Indeed, the sparse availability of labeled data is a major barrier to artificial-intelligence-assisted drug discovery. One solution to this problem is to develop algorithms that can cope with relatively heterogeneous and scarce data. Transfer learning is a type of machine learning that can leverage existing, generalizable knowledge from other related tasks to enable learning of a separate task with a small set of data. Deep transfer learning is the most commonly used type of transfer learning in the field of drug discovery. This Perspective provides an overview of transfer learning and related applications to drug discovery to date. Furthermore, it provides outlooks on the future development of transfer learning for drug discovery.

Mesh:

Year:  2020        PMID: 32672961     DOI: 10.1021/acs.jmedchem.9b02147

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   7.446


  26 in total

1.  Scoring Functions for Protein-Ligand Binding Affinity Prediction using Structure-Based Deep Learning: A Review.

Authors:  Rocco Meli; Garrett M Morris; Philip C Biggin
Journal:  Front Bioinform       Date:  2022-06-17

2.  Automatic identification of meibomian gland dysfunction with meibography images using deep learning.

Authors:  Yi Yu; Yiwen Zhou; Hongmei Zheng; Yanning Yang; Miao Tian; Yabiao Zhou; Yuejiao Tan; Lianlian Wu
Journal:  Int Ophthalmol       Date:  2022-09-19       Impact factor: 2.029

3.  OptNCMiner: a deep learning approach for the discovery of natural compounds modulating disease-specific multi-targets.

Authors:  Seo Hyun Shin; Seung Man Oh; Jung Han Yoon Park; Ki Won Lee; Hee Yang
Journal:  BMC Bioinformatics       Date:  2022-06-07       Impact factor: 3.307

Review 4.  Ab Initio Machine Learning in Chemical Compound Space.

Authors:  Bing Huang; O Anatole von Lilienfeld
Journal:  Chem Rev       Date:  2021-08-13       Impact factor: 60.622

5.  Large-Scale Modeling of Multispecies Acute Toxicity End Points Using Consensus of Multitask Deep Learning Methods.

Authors:  Sankalp Jain; Vishal B Siramshetty; Vinicius M Alves; Eugene N Muratov; Nicole Kleinstreuer; Alexander Tropsha; Marc C Nicklaus; Anton Simeonov; Alexey V Zakharov
Journal:  J Chem Inf Model       Date:  2021-02-03       Impact factor: 4.956

6.  Target Prediction Model for Natural Products Using Transfer Learning.

Authors:  Bo Qiang; Junyong Lai; Hongwei Jin; Liangren Zhang; Zhenming Liu
Journal:  Int J Mol Sci       Date:  2021-04-28       Impact factor: 5.923

7.  Assigning confidence to molecular property prediction.

Authors:  AkshatKumar Nigam; Robert Pollice; Matthew F D Hurley; Riley J Hickman; Matteo Aldeghi; Naruki Yoshikawa; Seyone Chithrananda; Vincent A Voelz; Alán Aspuru-Guzik
Journal:  Expert Opin Drug Discov       Date:  2021-06-15       Impact factor: 7.050

Review 8.  Representation of molecules for drug response prediction.

Authors:  Xin An; Xi Chen; Daiyao Yi; Hongyang Li; Yuanfang Guan
Journal:  Brief Bioinform       Date:  2022-01-17       Impact factor: 13.994

Review 9.  Prediction of antischistosomal small molecules using machine learning in the era of big data.

Authors:  Samuel K Kwofie; Kwasi Agyenkwa-Mawuli; Emmanuel Broni; Whelton A Miller Iii; Michael D Wilson
Journal:  Mol Divers       Date:  2021-08-05       Impact factor: 2.943

Review 10.  Automation and data-driven design of polymer therapeutics.

Authors:  Rahul Upadhya; Shashank Kosuri; Matthew Tamasi; Travis A Meyer; Supriya Atta; Michael A Webb; Adam J Gormley
Journal:  Adv Drug Deliv Rev       Date:  2020-11-24       Impact factor: 15.470

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