Essam Hassan Mohamed1,2, Youssef Saeed Alghamdi1, Salama Mostafa Abdel-Hafez1,3, Mohamed Mohamed Soliman4,5, Saad H Alotaibi6, Magdy Yassin Hassan1,7, Nasr Al-Deen Hany8, Hamada H Amer6,9. 1. Department of Biology, Turabah University College, Taif University, Saudi Arabia. 2. Department of Microbiology, Faculty of Veterinary Medicine, Zagazig University, Zagazig, Egypt. 3. Immunobiology and Immunopharmacology Unit, Animal Reproduction Research Institute, Giza, Egypt. 4. Clinical Laboratories Sciences, Turabah University College, Taif University, Turabah, Saudi Arabia. 5. Biochemistry Department, Faculty of Veterinary Medicine, Benha University, Benha, Egypt. 6. Chemistry Department, Turabah University College, Turabah, Taif University, Saudi Arabia. 7. Reproductive Disease Department, Animal Reproduction Research Institute, Giza, Egypt. 8. Microbiology Laboratory, King Faisal Medical Complex, Saudi Arabia. 9. Animal Medicine and Infectious Diseases Department, Faculty of Veterinary Medicine, University of Sadat City, Egypt.
Abstract
OBJECTIVE: The aim of this study was to examine the effect of some natural compounds against multidrug-resistant bacteria. METHODS: Forty-three bacterial strains were collected. Disc diffusion and minimum inhibitory concentration (MIC) tests were carried out for natural compounds including quercetin, Acacia nilotica, Syzygium aromaticum, and Holothuria atra. Scanning electron microscope analysis and bacterial DNA apoptosis assays were performed. RESULTS: Staphylococcus aureus strains were resistant to imipenim, ampicillin, and penicillin. Most Escherichia coli strains were resistant to amoxicillin, clavulanat, and ampicillin. Finally, tigecycline was effective with Klebsiella pneumoniae and was resistant to all antibiotics. Only S aromaticum had an antibacterial effect on K pneumoniae. Most S aureus strains were sensitive to S aromaticum, A nilotica, and quercetin. All examined natural extracts had no effect on E coli. Holothuria atra had no effect on any of the strains tested. Minimum inhibitory concentration and minimum bactericidal concentration values for examined plants against S aureus were 6.25 to 12, 1.6 to 3.2, and 9.12 to 18.24 mg/mL, respectively. Syzygium aromaticum was active against K pneumoniae with an MIC of 12.5 mg/mL. Scanning electron microscope analysis performed after 24 and 48 hours of incubation showed bacterial strains with distorted shapes and severe cell wall damage. Syzygium aromaticum, quercetin, and A nilotica showed clear fragmentations of S aureus DNA. CONCLUSIONS: Current findings confirmed the beneficial effect of using natural products such as clove (S aromaticum), quercetin, and A nilotica as a promising therapy to overcome multidrug resistant bacteria.
OBJECTIVE: The aim of this study was to examine the effect of some natural compounds against multidrug-resistant bacteria. METHODS: Forty-three bacterial strains were collected. Disc diffusion and minimum inhibitory concentration (MIC) tests were carried out for natural compounds including quercetin, Acacia nilotica, Syzygium aromaticum, and Holothuria atra. Scanning electron microscope analysis and bacterial DNA apoptosis assays were performed. RESULTS: Staphylococcus aureus strains were resistant to imipenim, ampicillin, and penicillin. Most Escherichia coli strains were resistant to amoxicillin, clavulanat, and ampicillin. Finally, tigecycline was effective with Klebsiella pneumoniae and was resistant to all antibiotics. Only S aromaticum had an antibacterial effect on K pneumoniae. Most S aureus strains were sensitive to S aromaticum, A nilotica, and quercetin. All examined natural extracts had no effect on E coli. Holothuria atra had no effect on any of the strains tested. Minimum inhibitory concentration and minimum bactericidal concentration values for examined plants against S aureus were 6.25 to 12, 1.6 to 3.2, and 9.12 to 18.24 mg/mL, respectively. Syzygium aromaticum was active against K pneumoniae with an MIC of 12.5 mg/mL. Scanning electron microscope analysis performed after 24 and 48 hours of incubation showed bacterial strains with distorted shapes and severe cell wall damage. Syzygium aromaticum, quercetin, and A nilotica showed clear fragmentations of S aureus DNA. CONCLUSIONS: Current findings confirmed the beneficial effect of using natural products such as clove (S aromaticum), quercetin, and A nilotica as a promising therapy to overcome multidrug resistant bacteria.
Bacterial resistance is one of the most critical problems currently facing public
health agencies worldwide. Both human and veterinary medical practices use a large
variety of antibiotics; unfortunately, bacterial resistance has seriously lowered
their efficacy.[1] Bacterial resistance may occur naturally, but the long history of the misuse
of antibiotics in the treatment of viral and other diseases not caused by bacteria
has accelerated the occurrence of bacterial resistance. Increased resistance is
becoming problematic to treat as antibiotics become ineffective.[2] Recent research has examined how to change the way antibiotics are prescribed
and used. One goal of pharmaceutical companies is the discovery of new substances to
reduce and treat bacterial resistance. Natural extracts are one of the alternative
sources available that may solve the problem of bacterial resistance.Multiple drug resistance has increased because of the random use of antibiotics in
the treatment of infectious diseases,[3,4] a critical situation that has forced researchers to seek new antimicrobial
substances. Natural extracts are considered to be one of the major natural sources
containing as yet undiscovered antimicrobial substances.[5] Therefore, there is a need to develop alternative ways to treat infectious
diseases using medicinal plants[6,7] and substances secreted by some animals, such as sea cucumber
(Holothuria atra), a marine invertebrate found on the seafloor.[8]
Holothuria atra has cytotoxic, antioxidant, antibacterial,
anti-inflammatory, antiviral, antitumor, and anticancer properties.[9] Clove (Syzygium aromaticum) has been used in traditional
medicine for thousands of years in Europe and Asia.[10] Clove oil has a great many medicinal uses, with anti-inflammatory,
anti-mutagenic, and antioxidant properties. It has also been used as an antibiotic
because of its antimicrobial properties. Many people use cloves and clove oil in
alternative remedies and the treatment of many infections.[11,12]
Acacia nilotica is a plant with a variety of functions that can be
used in the treatment of many diseases.[13] It contains several bioactive components,[14] including phlobatannin, tannin, gallic acid, catechin, protocatechuic acid,
pyrocatechol, epigallocatechin, 5-epigallocatechin-7gallate, and 7-digallate.[15] The bark of the plant is commonly used for treatment of respiratory
manifestations, diarrhea, leukoderma, and bleeding.[16] Moreover, its tender leaves and pods are used in the treatment of
Klebsiella sp., Pseudomonas sp., and
Salmonella typhimurium infections in humans.[17] Quercetin is a well-known bioflavonoid that has biological properties. It has
beneficial antioxidant, anti-inflammatory, antimutagenic, anticancer, antimicrobial,
and antiviral activities.[18] The aim of this research was to study the antibacterial effects of some
natural extracts and quercetin in a trial to treat and control some of the multidrug
resistant bacteria considered dangerous to human and animal health.
Methods
Bacterial Samples
Forty-three different bacterial strains were included in this study:
Staphylococcus aureus (n = 21), Escherichia
coli (n = 17), and Klebsiella pneumoniae (n = 5).
All bacterial strains were kindly donated by patients admitted to
microbiological investigations at the King Faisal Hospital laboratories. All
patients read, agreed to, and signed the ethical approval obtained from the
Directorate of Health Affairs in Taif, Kingdom of Saudi Arabia. The original
specimens (wounds, sputum, urine, catheters, and blood) were cultured on blood
agar and MacConkey agar (Difco), then Gram staining was done, and complete
diagnosis along with sensitivity test for all bacterial strains was done by
Phoenix Automated Microbiology System (BD Diagnostics System). Each strain was
freshly cultivated separately in tryptic soy broth (Difco) at 37 °C for 24
hours. The cells were harvested by centrifugation at 5000 × g
for 10 minutes, washed twice, and then suspended to a final cell density equal
to 0.5 McFarland turbidity standards (1.6 × 107 CFU/mL) just before the
beginning of the experiment.
Preparation of Natural Extracts
Clove Water Extract
Clove (S aromaticum) flower buds were selected based on their
traditional usage as folk medicine in our Arabic area. The plants were purchased
in dried form from Ubuy Co. Syzygium aromaticum flower buds (10
g) were soaked in 100 mL cold, sterile distilled water for 24 hours. This
clove–water mixture was incubated for 30 minutes in a water bath at 37 °C with
frequent shaking and kept for another 24 hours.[19]
Acacia nilotica Extract
Acacia nilotica seeds were purchased from Ubuy Co in dried
form. Seeds were rinsed and dried at 28 °C ± 2 °C for 2 weeks. The seeds were
minced using a blender. The powdered seeds (100 g) were soaked in 800 mL sterile
distilled water with reflux for 6 hours. The resulting mixture was filtered and
allowed to evaporate using a rotary evaporator at 50 °C. The dried extract was
kept sterile and stored at −20°C until use.[20] The identity of clove and A nilotica were confirmed by a
botanist (Prof Yassin Al-ssodany) at the Botany Department, College of Science,
Kafrelsheikh University, Egypt.
Holothuria Atra
Holothuria atra were obtained from Thuwal. The taxonomy of
H atra was confirmed according to the methods used in
previous studies.[21] The animals were transported in an ice box, rinsed thoroughly, and then
the animal’s body wall was removed and soaked in a methanol water (50:50)
solution for 16 hours with shaking. The mixture was filtered, and the remaining
filtrate soaked in the 50:50 methanol water solution again. The 2 portions were
pooled and concentrated using a rotary evaporator. The powdered extract was
obtained by freeze drying and stored at −20 °C until use.[22]
Quercetin
Quercetin was purchased from Sigma-Aldrich and freshly dissolved in dimethyl
sulfoxide (DMSO) at a concentration of 200 mg/mL of DMSO just before the
beginning of the experiment.
Antibacterial Activity of Syzygium aromaticum, Acacia nilotica, Quercitin,
and Holothuria atra
The antibacterial activity of S aromaticum, A
nilotica, quercitin, and H atra was assessed using
the method described by Duraipandiyan et al[23] with slight modifications. Briefly, the bacterial count of each isolate
used was adjusted to 0.5 McFarland turbidity standards in sterile saline, poured
on the surface of a Petri dish containing Mueller Hinton agar (Difco), and
properly spread. A volume of 50 µL of each of the stock concentrations of
quercetin and H atra in DMSO (200 mg/mL), A
nilotica (100 mg/mL distilled water), and S
aromaticum (200 mg/mL, distilled water) was loaded on 6-mm sterile
discs. An amoxicillin disc (10 µg/mL) and a ciprofloxacin disc (5 µg/mL) were
used as negative and positive controls for the inhibition zones, respectively.
The plates were incubated at 37 °C for 24 hours. The results represent the
measurements of the inhibition zones. All experiments were repeated in
triplicate.
Determination of Minimum Inhibitory Concentration
The microdilution technique was used to determine the minimum inhibitory
concentration (MIC) of S aromaticum, quercetin, and A
nilotica as recommended by CLSI.[24] With slight modifications, stock concentrations of S
aromaticum, quercetin, and A nilotica were
prepared. Each well was filled with 100 µL of Mueller Hinton broth (Difco) and
100 µL of each of the stock concentration of the 2 extracts; quercetin was added
to the first well with a double-fold serial dilution. A volume of 100 µL of
inoculated broth culture containing (1.6 × 107) CFU/mL was added to all wells
except for negative control wells. Finally, the plates were incubated at 37 °C
overnight. Wells containing DMSO in Mueller Hinton broth along with standardized
bacterial inocula were used as growth control, while wells containing Mueller
Hinton broth without any treatment or bacterial inoculum were used as negative
control. The last well showing no visible turbidity provided the MIC value;
wells showing no growth on nutrient agar after 24 hours of incubation provided
the minimum bactericidal concentration (MBC) value.
Scanning Electron Microscope
Staphylococcus aureus was cultured overnight in tryptic soy
broth (Hi media), and the broth turbidity was adjusted to 0.5 McFarland
turbidity standards and then treated with equal volumes of S
aromaticum, quercetin, and A nilotica (MIC dose as
in Table 1) and
incubated for 24 and 48 hours to check the bacterial morphology using scanning
electron microscope (SEM). The treated broth culture was fixed overnight with an
equal volume of 2% glutaraldehyde in 5% sucrose. The specimens were prepared for
scanning electron microscopy as described previously.[25] The morphological changes were photographed under the analytical SEM
(model JEOLJSM-6390 LA serial number PM14400099) in the Electron Microscope Unit
of Taif University.
Table 1.
Minimum inhibitory concentration (MIC) and MBC Tests of Syzygium
Aromaticum, Acacia nilotica, and Quercetin
Against the Bacterial Strains Examined.
Minimum inhibitory concentration (MIC) and MBC Tests of Syzygium
Aromaticum, Acacia nilotica, and Quercetin
Against the Bacterial Strains Examined.Abbreviations: MIC, minimum inhibitory concentration; MBC, minimum
bactericidal concentration; NT, not tested.
Bacterial Apoptosis
Staphylococcus aureus was grown in tryptic soy broth overnight
at 37 °C, and the bacterial count was adjusted to 0.5 McFarland turbidity
standards. A DNA cleavage assay was performed according to methods of Nagata[26] with some modifications. The broth-cultured bacteria were incubated with
an MIC dose of S aromaticum, quercetin, and A
nilotica as shown in Table 1 and incubated at 37 °C for 8,
24, 48, and 72 hours for both S aromaticum and A
nilotica and for 24, 48, and 72 hours for quercetin. Bacterial
broth was precipitated after centrifugation at 10 000 RPM for 5 minutes. The
bacterial pellets were suspended in 400 µL diethyl pyrocarbonate (DEPC) water
and heated at 100 °C for 10 minutes, followed by centrifugation for 10 minutes
at 20 000 × g. The clear supernatant was removed and saved for
DNA precipitation and concentration. Ice-cold ethanol (1 mL) was added to the
supernatant, shaken gently, and incubated at −20 °C overnight. The next day, it
was centrifuged at 12 000 RPM for 10 minutes at 4 °C and the washed DNA pellets
were left to air dry. The pellets were reconstituted by the addition of 100 µL
nano pure water. The DNA concentration was measured using a BIO-RAD
spectrophotometer at OD 260. Extracted DNA (250 ng) was loaded in a 1% agarose
gel stained with ethidium bromide and imaged using a gel documentation system
(Bio-Rad).
Results
Antibiotic Sensitivity Test
The multidrug resistant bacterial strains collected for this study are S
aureus, E coli, and K pneumoniae. Strains were
collected from wounds, sputum, urine, catheters, and blood. The collected
strains were tested against different antibiotics using The Phoenix Automated
Microbiology System. The results of antibiograms showed that the most effective
drug against S aureus were daptomycin, linezolid, moxifloxacin,
and vancomycin (100%). In contrast, all S aureus strains were
resistant to imipenim, penicillin, and ampicillin (100%, 95.2%, and 95.2%,
respectively) as seen in Figure
1. Escherichia coli was sensitive to amikacin (94%)
and resistant to amoxicillin, clavulanat, and ampicillin with approximate
percentage of 94% as seen in Figure 2. Klebsiella pneumoniae was slightly
sensitive to tigecycline and resistant to all tested antibiotics (Figure 3).
Figure 1.
Antibiotic sensitivity test for Staphylococcus aureus
strains (n = 21). R; resistant, S; sensitive. The most effective drug
were daptomycin, linezolid, moxifloxacin, and vancomycin (100%).
Meanwhile, all strains were very resistant to imipenim, penicillin, and
ampicillin (100%, 95.2%, and 95.2%, respectively).
Figure 2.
Antibiotic sensitivity test for Escherichia coli (n =
17). R; resistant, S; sensitive. All E coli strains
were sensitive to amikacin (94%). All strains were resistant to
amoxicillin, clavulanat, and ampicillin (94%).
Figure 3.
Antibiotic sensitivity test for Klebsiella pneumoniae
strains (n = 5). R; resistant, S; sensitive. All Klebsiella
pneumoniae strains were slightly sensitive to tigecycline
and were resistant to all tested antibiotics.
Antibiotic sensitivity test for Staphylococcus aureus
strains (n = 21). R; resistant, S; sensitive. The most effective drug
were daptomycin, linezolid, moxifloxacin, and vancomycin (100%).
Meanwhile, all strains were very resistant to imipenim, penicillin, and
ampicillin (100%, 95.2%, and 95.2%, respectively).Antibiotic sensitivity test for Escherichia coli (n =
17). R; resistant, S; sensitive. All E coli strains
were sensitive to amikacin (94%). All strains were resistant to
amoxicillin, clavulanat, and ampicillin (94%).Antibiotic sensitivity test for Klebsiella pneumoniae
strains (n = 5). R; resistant, S; sensitive. All Klebsiella
pneumoniae strains were slightly sensitive to tigecycline
and were resistant to all tested antibiotics.
Disc Diffusion Test of Syzygium aromaticum, Quercetin, Acacia nilotica, and
Holothuria atra
Next, we examined the antibacterial activity of S aromaticum,
quercetin, A nilotica, and H atra against
bacterial strains using the disc diffusion test. The results of the
antimicrobial tests are shown in Table 2. The highest inhibition zone
was achieved with S aromaticum, followed by quercetin and
A nilotica, with zone sizes of 18.14 ± 0.659, 16.95 ±
0.760, and 14.94 ± 0.368 mm, respectively. Only S aromaticum
demonstrated antibacterial activity against K pneumoniae, with
an inhibition zone size of 13.76 ± 0.545 mm. None of the natural extracts
examined had any effect on any of the E coli tested, as shown
in Figure 4. Finally,
the extract of H atra was not effective against any of the
bacterial strains tested.
Table 2.
Inhibitory Activity of Syzygium aromaticum, Acacia
nilotica, and Quercetin Using the Disc Diffusion
Test.a
Inhibition zone in mm, mean ±
SE
Syzygium aromaticum
Acacia nilotica
Quercetin
Holothuria atra
Ciprofloxacin
Staphylococcus aureus (n = 21)
18.14 ± 0.659
14.94 ± 0.368
16.95 ± 0.760
Nz
20.33 ± 0.952
Klebsiella pneumoniae (n = 5)
13.76 ± 0.545
Nz
Nz
Nz
19.35 ± 0.969
Escherichia coli (n = 17)
Nz
Nz
Nz
Nz
18.71 ± 0.662
Abbreviations: Nz, no inhibition zone; SE, standard error.
a Values are means ± standard error of means for 3
different experiments carried out in triplicate.
Figure 4.
Disc diffusion test showing inhibition zones in mm. A, Inhibition zones
of Acacia nilotica, ciprofloxacin, and amoxicillin. B,
Inhibition zones of Syzygium aromaticum, ciprofloxacin,
and amoxicillin. C, Inhibition zones of quercetin, ciprofloxacin, and
amoxicillin.
Inhibitory Activity of Syzygium aromaticum, Acacia
nilotica, and Quercetin Using the Disc Diffusion
Test.aAbbreviations: Nz, no inhibition zone; SE, standard error.a Values are means ± standard error of means for 3
different experiments carried out in triplicate.Disc diffusion test showing inhibition zones in mm. A, Inhibition zones
of Acacia nilotica, ciprofloxacin, and amoxicillin. B,
Inhibition zones of Syzygium aromaticum, ciprofloxacin,
and amoxicillin. C, Inhibition zones of quercetin, ciprofloxacin, and
amoxicillin.Minimum inhibitory concentration and MBC test results are shown in Table 1. The results
showed that the MIC/MBC of S aromaticum, quercetin, and
A nilotica were 6.25/12.5 mg/mL, 9.12/18.24 mg/mL, and
1.6/3.2mg/mL, respectively, against S aureus strains.
Syzygium aromaticum extract was the most effective product
against K pneumoniae, with MIC/MBC values of 12.25/25 mg/mL, as
show in Table 1.
Scanning Electron Microscopy
Scanning electron microscopy of the staphylococcal strains after incubation with
S aromaticum, quercetin, and A nilotica at
the MIC dose for 24 and 48 hours is shown in Figures 5 and 6. The results of SEM revealed that
S aromaticum, A nilotica, and quercetin
induced a significant variation in the size of the bacterial cells compared to
those of controls (Figures 5 and 6). After 24 hours of incubation, the cells became smaller compared
to those of control untreated bacteria (Figure 5A and B and Figure 6A). After 48 hours of incubation,
the changes in the bacterial morphology became clearer, with distorted shapes
compared to those of untreated controls. These changes resulted from the
deformity of the bacterial cell wall with a change in the round characteristic
shape of the bacterium. In addition, there were clear areas with no bacterial
growth as seen in Figure 5B and
D and Figure
6B.
Figure 5.
Scanning electron microscope (SEM) analysis. (A) Syzygium
aromaticum with Staphylococcus aureus
after 24 hours. (B) Syzygium aromaticum with S
aureus after 24 hours; (C) Acacia nilotica
with S aureus after 24 hours; (D) Acacia
nilotica with S aureus after 48 hours.
Figure 6.
A, Quercetin with Staphylococcus aureus after 24 hours.
B, Quercetin with Staphylococcus aureus after 48 hours.
C, Normal control.
Scanning electron microscope (SEM) analysis. (A) Syzygium
aromaticum with Staphylococcus aureus
after 24 hours. (B) Syzygium aromaticum with S
aureus after 24 hours; (C) Acacia nilotica
with S aureus after 24 hours; (D) Acacia
nilotica with S aureus after 48 hours.A, Quercetin with Staphylococcus aureus after 24 hours.
B, Quercetin with Staphylococcus aureus after 48 hours.
C, Normal control.DNA fragmentation of quercetin, A nilotica, and S
aromaticum was performed using the bacterial apopotosis technique.
As shown in Figures 7
and 8, incubation of
S aureus in tryptic soy broth with quercetin (9.12 mg/mL)
for 24, 48, and 72 hours completely induced 100% DNA cleavage in time dependent
manner. Bacterial DNA did not appear in an ethidium bromide stained gel (1%)
when compared to the control lane (S aureus without treatment).
In parallel analyses, DNA cleavage was assessed after incubation with A
nilotica and S aromaticum. Lanes 3 to 6 and 9 to
12 for A nilotica and S aromaticum,
respectively, show bacterial DNA cleavage as a white smear and white
illumination starting from 8 hours of incubation through 72 hours after
treatment when compared with lanes 2 and 8 (untreated bacteria; Figure 8). DNA was
fragmented and degraded in time-dependent manner confirming antibacterial
activity for A nilotica and S aromaticum.
Figure 7.
DNA cleavage of quercetin with Staphylococcus aureus.
Lane 1: DNA ladder; Lane 2: S aureus control without
treatment; Lane 3: quercetin at 24 hours; Lane 4: quercetin at 48 hours;
and Lane 5: quercetin at 72 hours.
Figure 8.
DNA cleavage of Acacia nilotica and Syzygium
aromaticum with Staphylococcus aureus.
Lane 1: 100-bp DNA ladder; Lane 2: Staphylococcus
aureus control without treatment; Lanes 3-6: Acacia
nilotica treated bacteria for 8, 24, 48, and 72 hours; Lane
7: 100 DNA ladder; Lane 8: S aureus control without
treatment; Lanes 9-12: Syzygium aromaticum treated
bacteria for 8, 24, 48, and 72 hours.
DNA cleavage of quercetin with Staphylococcus aureus.
Lane 1: DNA ladder; Lane 2: S aureus control without
treatment; Lane 3: quercetin at 24 hours; Lane 4: quercetin at 48 hours;
and Lane 5: quercetin at 72 hours.DNA cleavage of Acacia nilotica and Syzygium
aromaticum with Staphylococcus aureus.
Lane 1: 100-bp DNA ladder; Lane 2: Staphylococcus
aureus control without treatment; Lanes 3-6: Acacia
nilotica treated bacteria for 8, 24, 48, and 72 hours; Lane
7: 100 DNA ladder; Lane 8: S aureus control without
treatment; Lanes 9-12: Syzygium aromaticum treated
bacteria for 8, 24, 48, and 72 hours.
Discussion
The appearance of multidrug resistant pathogens threatens the clinical effectiveness
of many commonly used antibiotics.[27] As a result, there is an increasing demand for the discovery of new
antibiotics with novel modes of action against these multidrug resistant pathogens.
Antimicrobial substances of natural origin have the potential to play a great
therapeutic role in the control of numerous infectious diseases.[28] Antimicrobial testing of S aureus, E coli, and K
pneumoniae revealed that the most effective drug against S
aureus were linezolid, daptomycin, moxifloxacin, and vancomycin (100%
sensitive). Meanwhile, they were all resistant to imipenim, ampicillin, and
penicillin (100%, 95.2%, and 95.2%, respectively). Previous studies that examined
the antibiotic susceptibility of S aureus reported high rates of
resistance to penicillin (98.9%) and erythromycin (61.6%), with only 1 isolate
resistant to vancomycin.[29]
Escherichia coli strains were sensitive to amikacin and ceftazidime
(94% and 88%, respectively) and were resistant to amoxicillin, clavulanat, and
ampicillin (94%). Finally, K pneumoniae strains were sensitive to
tigecycline and resistant to all tested antibiotics. Comparable results reported by
Gautam et al[30] confirmed that E coli strains were sensitive to ceftazidime
(99%) and imipenem (83%). Klebsiella pneumoniae was sensitive to
cefotaxime (87%). Using disc diffusion techniques, MIC and MBC tests were performed
to detect any antimicrobial actions of natural extracts and quercetin. The aqueous
extract of S aromaticum was the most effective against S
aureus strains, with a mean zone size of 18.14 ± 0.659 mm;
additionally, it was the only product tested in this study shown to be effective
against K pneumoniae, with a mean zone size of 13.76 ± 0.545 mm. No
inhibition zones were observed following tests with any of the E
coli. The MIC value was 6.25 and 12.5 mg/mL for S
aureus and K pneumoniae, respectively. Other studies
carried out in parallel investigated the effect of S aromaticum
against several gram-positive and gram-negative bacteria. The MIC values for
S aureus and E coli were 5.4 ± 1.08 mg/mL; the
inhibition zones were 25.3 ± 0.66 and 31.6 ± 0.88 mm. This expected effect was
attributed to the chemical compounds known as eugenol, caryophyllyne, and eugenyl acetate.[31] While others[32] have shown that the ethanolic extract of S aromaticum
inhibited the growth of food borne pathogens such as S aureus and
K pneumoniae, which contradicts our findings regarding a lack
of activity against E coli, it is possible that this could be
attributed to the method of extraction used in both studies.The aqueous extract of A nilotica showed strong suppression of
clinical strains of S aureus with mean inhibition zones of 14.94 ±
0.368 mm. The MIC and MBC values were 1.6 and 3.2 mg/mL, respectively. Previous
reports have confirmed that A nilotica was active against S
aureus, E coli, and K pneumoniae,
respectively. The MIC and MBC for A nilotica against S
aureus were 0.5 and 1.0 mg/mL[33] and against E coli were 6.25 and 12.5 mg/mL.[34] As confirmed before, the antimicrobial activity of A
nilotica extract is attributed to terpenes thought to cause membrane
disruption due to lipophilic activity.[35] It may be that the outer membrane layer of lipopolysaccharides in the cell
wall of gram-negative bacteria is unique, rendering them impermeable to certain
antibacterial agents and explaining why the effect is potent against gram-positive
bacteria and weak against gram-negative strains.[36] Other studies have attributed the antimicrobial effects of A
nilotica to the methyl esters, methyl functional groups, and
unsaturated furan ring it contains.[36]Flavonoids, a group of chemicals present in plants and also known as phytonutrients,
have a wide range of antimicrobial activities beneficial to humans. Previous studies
of the antibacterial activity of flavonoids has demonstrated that they include
inhibition of nucleic acid synthesis, inhibition of energy synthesis, reduction in
cell attachment (biofilm formation), changes in cell permeability, and cytoplasmic
membrane damage.[37] Disc diffusion tests have shown that quercetin (a major flavonoid) strongly
suppressed most strains of S aureus, with an inhibition zone of
16.95 ± 0.760 mm. The MIC and MBC values of quercetin were 9.12/18.24 mg/mL.
Quercetin did not affect the gram-negative bacteria tested in this study. Quercetin
was more effective against gram-positive bacteria. A previous study showed that
quercetin disrupted cell walls and was effective against S aureus
but not E coli.[38]Holothuria atra extracts have been shown to have strong suppressive
effects against bacterial and fungal pathogens. However, in this study, H
atra exerted no effect on any of the bacterial strains tested. Similar
results have been reported by others[39] for Candida albicans, Pseudomonas aeruginosa, and K
pneumoniae, but the extract has been reported to have an antibacterial
effect against Staphylococcus epidermidis. The difference in
results may be due the high fat content of the extract or a difference in extraction
methods. Comparable studies showed that a methanolic extract of H
atra had a potent antimicrobial effect against Aspergillus
niger. However, another study using the same methanolic extract
demonstrated no antibacterial effects against C albicans, S aureus, P
aeruginosa, or E coli.[40]Scanning electron microscope analysis was also included to investigate the mode of
action of the natural extracts and quercetin compound examined. Past studies have
reported that most of the treated bacterial cells became pitted, deformed, and
broken, indicating that the A nilotica aqueous extract had a
harmful effect on the cell wall of the bacteria strains examined.[41] Other studies using field emission SEM reported that methanolic seed extracts
of S cumini induced a significant variation in the size of
Bacillus subtilis cells.[42] Scanning electron microscope analysis of the effects of treatment with
quercetin showed that it exhibited antibacterial activity characterized by
disruption of the integrity of the cell walls in both gram-positive and
gram-negative bacteria.[43]A bacterial apoptosis technique was used to assess the mode of action of the products
tested. Syzygium aromaticum, quercetin, and A
nilotica induced lysis of and/or injury to bacterial DNA. Using MIC and
Triplex PCR showed the time-dependent effects of these agents on bacterial DNA, with
the most pronounced effects observed at 72 hours of incubation, confirmed by the
absence of bacterial DNA on an ethidium bromide stained gel (1%). A previous study
that examined aqueous extract of S aromaticum induced DNA
fragmentation in B subtilis at 24, 48, and 72 hours of incubation
reported time-dependent results[42] that coincide with our findings. This indicates that the aqueous extract of
S aromaticum has a pronounced effect on the degradation of DNA
of S aureus accompanied by inhibition of bacterial protein
synthesis.
Conclusions
This study confirmed the antibacterial activity of S aromaticum,
quercetin, and A nilotica against gram-negative and gram-positive
bacteria. These observations can be exploited to treat bacterial infections using
natural products instead of commonly used antibiotics or in combination with
them.
Authors: Sonia Ouadi; Nicolas Sierro; Simon Goepfert; Lucien Bovet; Gaetan Glauser; Armelle Vallat; Manuel C Peitsch; Felix Kessler; Nikolai V Ivanov Journal: Commun Biol Date: 2022-07-09