| Literature DB >> 32664906 |
Duen-Pang Kuo1,2, Po-Chih Kuo3, Yung-Chieh Chen1, Yu-Chieh Jill Kao4, Ching-Yen Lee5,6, Hsiao-Wen Chung7, Cheng-Yu Chen8,9,10,11,12,13.
Abstract
BACKGROUND: Recent trials have shown promise in intra-arterial thrombectomy after the first 6-24 h of stroke onset. Quick and precise identification of the salvageable tissue is essential for successful stroke management. In this study, we examined the feasibility of machine learning (ML) approaches for differentiating the ischemic penumbra (IP) from the infarct core (IC) by using diffusion tensor imaging (DTI)-derived metrics.Entities:
Keywords: Diffusion tensor imaging; Infarct core; Ischemic penumbra; Machine learning
Mesh:
Year: 2020 PMID: 32664906 PMCID: PMC7362663 DOI: 10.1186/s12929-020-00672-9
Source DB: PubMed Journal: J Biomed Sci ISSN: 1021-7770 Impact factor: 8.410
Fig. 1Definitions of the Ischemic Penumbra (IP), Infarct core (IC), and Normal Tissue (NT) in a Rat Subjected to Permanent Middle Cerebral Artery Occlusion (pMCAO). IC was defined as the blue area in the mean diffusivity (MD) map (a) and perfusion deficit at 0.5 h after pMCAO is shown in (b). Perfusion–diffusion mismatch is illustrated in (c) and (d), where the red region indicates the IC and the green region indicates the IP. The NT was defined as the region in the ipsilateral hemisphere except for the IP and IC [white in (d)]. d Indicates the “label” for the IC, IP, and NT
Fig. 2Strategy of 2-level Classification and Validation. a The proposed 2-level strategy for voxel-wise classification to classify every voxel in the hemisphere into a tissue subtype (i.e., the IC, IP, or NT). b The validation methods include 5-fold cross validation in training phase and leave-one-out cross validation for the final prediction
Fig. 3Maps of Diffusion Tensor Imaging (DTI) Metrics Measured at 0.5 Hours After pMCAO. a Significant hypointensities on the ischemic lesion can be observed from MD, L, q, AD and RD maps but not from FA map. b The relative DTI metrics are shown. The intensity of the map represents the quantitative decreases or increases of the DTI metrics compared with the corresponding contralateral homologous tissue
Performances of the 2-level classifiers for the training dataset
| Classifier performance | ||||
|---|---|---|---|---|
| SVM | KNN | Decision tree | ||
| AUC | IC vs nonIC | 0.99 ~ 1 | 0.99 ~ 1 | 0.99 |
| IP vs NT | 0.96 ~ 0.98 | 0.98 | 0.78 ~ 0.80 | |
| Accuracy | IC vs nonIC | 96.3 ~ 96.7% | 96.4 ~ 96.6% | 95.4 ~ 95.8% |
| IP vs NT | 95.0 ~ 95.9% | 94.3 ~ 94.8% | 84.3 ~ 85.5% | |
| Sensitivity | IC vs nonIC (true rate for IC) | 95 ~ 96% | 95 ~ 96% | 94 ~ 96% |
IP vs NT (true rate for IP) | 85 ~ 86% | 80 ~ 81% | 30 ~ 36% | |
| Specificity | IC vs nonIC (true rate for nonIC) | 97 ~ 98% | 97% | 97% |
IP vs NT (true rate for NT) | 97 ~ 98% | 98% | 95 ~ 97% | |
Performances of the single-level classifiers for the training dataset
| Classifier | Accuracy | Sensitivity for IC | Sensitivity for IP | Sensitivity for NT |
|---|---|---|---|---|
| SVM | 81.7% | 97.0% | 29.0% | 79.1% |
| KNN | 90.5% | 96.0% | 46.8% | 95.0% |
| Decision Tree | 86.1% | 95.4% | 4.9% | 95.6% |
Performances of the 2-level SVM Classifiers for the Testing Dataset
| Accuracy | Range | Median | |
|---|---|---|---|
| IC vs. nonIC | 96.0 ± 2.3% | 88.2 ~ 98.9% | 96.7% |
| IP vs. NT | 80.1 ± 8.0% | 61.0 ~ 92.6% | 81.5% |
| hemisphere (IC + IP + NT) vs. PDM | 88.1 ± 6.7% | 69.5 ~ 96.9% | 90.0% |
Fig. 4Results of Slice-to-Slice Correspondence Analysis Between the Classifier-Estimated Volume and the Perfusion-Diffusion Mismatch -Defined Volume for the IP (a), IC (b), and NT (c)
Fig. 5Average of the Estimated Volume and Perfusion-Diffusion Mismatch Defined Volume for the IP, IC, and NT for the 14 rats. No significant differences were observed between the classifier-estimated volume and the perfusion-diffusion mismatch defined volume in the IP (P = .56), IC (P = .94) and NT (P = .78)
Fig. 6Demonstration of a Predicted Mismatch for 2 Rats. The conventional perfusion–diffusion mismatch and estimated mismatch are illustrated, where the red region indicates the IC and the green region indicates the IP. The NT is displayed in grayscale