Literature DB >> 32657331

Molecular tumor classification using DNA methylome analysis.

Martin Sill1,2, Christoph Plass3, Stefan M Pfister1,2,4, Daniel B Lipka5.   

Abstract

Tumor classifiers based on molecular patterns promise to define and reliably classify tumor entities. The high tissue- and cell type-specificity of DNA methylation, as well as its high stability, makes DNA methylation an ideal choice for the development of tumor classifiers. Herein, we review existing tumor classifiers using DNA methylome analysis and will provide an overview on their emerging impact on cancer classification, the detection of novel cancer subentities and patient stratification with a focus on brain tumors, sarcomas and hematopoietic malignancies. Furthermore, we provide an outlook on the enormous potential of DNA methylome analysis to complement classical histopathological and genetic diagnostics, including the emerging field of epigenomic analysis in liquid biopsies.
© The Author(s) 2020. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Entities:  

Year:  2020        PMID: 32657331     DOI: 10.1093/hmg/ddaa147

Source DB:  PubMed          Journal:  Hum Mol Genet        ISSN: 0964-6906            Impact factor:   6.150


  3 in total

1.  Club cells employ regeneration mechanisms during lung tumorigenesis.

Authors:  Yuanyuan Chen; Reka Toth; Sara Chocarro; Dieter Weichenhan; Joschka Hey; Pavlo Lutsik; Stefan Sawall; Georgios T Stathopoulos; Christoph Plass; Rocio Sotillo
Journal:  Nat Commun       Date:  2022-08-05       Impact factor: 17.694

2.  Methylation and copy number profiling: emerging tools to differentiate osteoblastoma from malignant mimics?

Authors:  Baptiste Ameline; Michaela Nathrath; Karolin H Nord; Felix Haglund de Flon; Judith V M G Bovée; Andreas H Krieg; Sylvia Höller; Jürgen Hench; Daniel Baumhoer
Journal:  Mod Pathol       Date:  2022-03-28       Impact factor: 8.209

3.  AmpliconDesign - an interactive web server for the design of high-throughput targeted DNA methylation assays.

Authors:  Maximilian Schönung; Jana Hess; Pascal Bawidamann; Sina Stäble; Joschka Hey; Jens Langstein; Yassen Assenov; Dieter Weichenhan; Pavlo Lutsik; Daniel B Lipka
Journal:  Epigenetics       Date:  2020-10-24       Impact factor: 4.528

  3 in total

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