Literature DB >> 32654583

Bibliometric analysis of calcium channel research (2010-2019).

Jingjing Shi1, Huan Wang1, Shuqing Shi2, Guozhen Yuan1, QiuLei Jia2, Shuai Shi1, Xuesong Zhang1, Yuanhui Hu1.   

Abstract

Calcium channels are involved in pathologies across all the major therapeutic areas involving the cardiac, neurological, metabolic, and respiratory systems. Although calcium channels have been the hotspot of multidisciplinary research for decades, the hotspots and frontier trends of calcium channel research have not been comprehensively analyzed by bibliometrics. Here, we collected scientific publications on calcium channel research in the past decade to explore the hotspots and frontier directions of calcium channel research by bibliometric analysis. Publications were retrieved from the Web of Science Core Collection (WOSCC) database from 2010 to 2019. Citespace5.6 R5 was used to perform bibliometric analysis on the countries, institutions, authors, and related research areas. In total, 26,664 articles were analyzed. The United States and the University of California are the most productive country and institution for calcium channel research. The most productive researchers were Lang, Florian, Zamponi, Gerald W, and Jan, Chung-Ren. PLoS One had the most significant number of publications (986). Research hotspots can be summarized as the regulation mechanism of calcium channels, calcium channel blockers, and ryanodine receptor. The research frontiers were the effect of calcium channel on cell proliferation, gene mutation, calcium channels in neuropathic pain, and calcium-signaling pathway. This is the first report to visualize and analyze hotspots and emerging trends in calcium channel research.

Entities:  

Keywords:  Bibliometric; calcium channel; citespace; visual analysis

Mesh:

Substances:

Year:  2020        PMID: 32654583      PMCID: PMC7515533          DOI: 10.1080/19336950.2020.1788903

Source DB:  PubMed          Journal:  Channels (Austin)        ISSN: 1933-6950            Impact factor:   2.581


Calcium channels are protein complexes that present on the cell membrane, endoplasmic reticulum or sarcoplasmic reticulum and allow calcium ions to flow through biological membranes quickly and selectively. Activation of calcium channels can promote the increase of free calcium ion concentration in cytoplasm. Calcium ions (Ca 2+) impact nearly every aspect of cellular life [1], including muscular contraction, neurotransmitter release, hormone secretion, and cell excitability control, cell cycle regulation, and cell communication, gene expression, cell metabolism, germ cell maturation, and fertilization, etc., [2,3]. According to different classification methods, calcium ion channels can be divided into the following categories: 1.Voltage-operated channels (VOCs); 2. Receptor-operated channels (ROCs); 3. Second-messenger-operated channels (SMOCs); 4. Transient receptor potential (TRP) ion-channels; 5. Inositol 1,4,5-trisphophate receptors (IP3Rs); 6. Ryanodine receptors (RYRs) [4]. Disturbance of calcium channels affects many diseases. Disorders of calcium channel function are associated with various cardiovascular diseases, such as atrial fibrillation, hypertension, and long QT syndrome [5]. Calcium is a ubiquitous mediator of many cell functions in the central nervous system (CNS) and has a pleiotropic effect in Alzheimer’s disease, Parkinson’s disease, Huntington’s disease, neuropsychiatric diseases, and other CNS disorders [6]. Studies have shown that calcium channel blockers have beneficial effects on obesity-related metabolic pathology [7]. And stable breathing requires the excitatory synaptic transmission of calcium channels [8]. Calcium channels are involved in pathologies across all the major therapeutic areas involving the cardiac, neurological, metabolic, and respiratory systems. Research on drugs acting on different calcium channel subtypes or subunits may have broad prospects in future therapeutic interventions [9]. Therefore, the use of bibliometric methods to sort out and summarize the existing research on calcium channel may provide better information for the study of calcium channels. A bibliometric study can calculate the productivity of institutions, countries, and authors and explore research hotspots/frontiers in specific fields [10,11]. CiteSpace is one of the bibliometric visualization tools for data analysis and visualization [12], and it can visualize and analyze emerging trends and transition patterns in the scientific literature. Although calcium channels have been the hotspot of multidisciplinary research for decades, no bibliometric studies regarding the trends in calcium channel research activity over the past decade have been published. Here, we collected scientific publications on calcium channel research in the past decade, using bibliometrics and visual analysis to explore the hotspots and frontier directions of calcium channel research and hope to provide researchers with some useful guidance.

Data collection

The data search was conducted on 22 April 2020. The retrieved data were collected within 1 day to avoid any potential deviation due to the daily updating of the database. The search keywords entered into the database were as follows: TS = (calcium channel* OR calcium ion channel* OR VGCC* OR VDCC*) and language:(English). The data for analysis were retrieved from the Science Citation Index Expanded (SCI-expanded) of Web of Science Core Collection (WoSCC) database from 2010 to 2019. In this study, the data were downloaded directly from the database as secondary data without further animal experiments. Therefore, no moral approval is required. In total, 34,283 publications were obtained, and the following document were excluded: review(4,563), meeting abstracts(1,792), editorial(435), proceedings paper(354), book chapter(340), letter(130), correction(76), early access(72), news item(15), retracted publication(16), biographical item(2), data paper(1) and reprint(1). In total, 26,664 articles were analyzed. The retrieval strategy of the experiments is shown in Figure 1.
Figure 1.

Flow chart of calcium channel researches inclusion.

Flow chart of calcium channel researches inclusion.

General information and annual publication output

A total of 26,664 articles were retrieved. To explore the trends of calcium channel research, we showed the number of articles per year in the form of a histogram. As shown in Figure 2, the number of publications on calcium channel research remained stable high in the past 10 years, the average annual number of publications was 2,666. It explained that the research on calcium channels was a popular research direction. The annual number of articles published in 2012–2014 was more than 2,700, which was the rapid development period of calcium channel research. The number of articles published in 2015–2019 declined, but it has remained at more than 2,500. The results showed that the field of calcium channel research had evolved from rapid to stable development in the past decade.
Figure 2.

The number of annual publications on calcium channel research from 2010 to 2019.

The number of annual publications on calcium channel research from 2010 to 2019.

Active countries and institutions

Co-occurrence map provides valuable information and helps researchers to identify the cooperative relationship [13]. Table 1 lists the top 10 countries and institutions contributed to publications on calcium channel. Countries and institutions co-occurrence maps are shown in Figure 3(a,b).
Table 1.

The top 10 countries and institutions contributed to publications on calcium channel research.

RankCountry/TerritoryFrequencyInstitutionFrequency
1USA9,781University of California1,143
2Peoples R China4,276Institut National de la Sante et de la Recherche Medicale (INSERM)693
3Germany2,388Harvard University620
4Japan2,197University of Texas System524
5England1,921University of London477
6Canada1,412National Institutes of Health (NIH)465
7France1,273Pennsylvania Commonwealth System of Higher Education Pcshe461
8Italy1,238Chinese Academy of Sciences375
9South Korea1,013Johns Hopkins University336
10Spain794University College London315
Figure 3.

The analysis of countries and institutions. (a). Network of countries/territories engaged in calcium channel research; (b). Network of institutions engaged in calcium channel research.

The top 10 countries and institutions contributed to publications on calcium channel research. Researchers from more than 132 countries/territories contributed to the 26,664 articles on calcium channel research. The USA, Peoples R China, Germany, Japan, and England were the top 5 productive countries (Table 1). The United States published the most papers (9,781 articles), followed by China (4,276 articles), and they were the two critical countries in calcium channel research. Figure 3(a) shows that the United States attached great importance to cooperation, and had close collaborations with China, Germany, Japan, and South Africa. Figure 3(b) shows that American institutions published most of the publications. The University of California produced the highest number of publications on calcium channels (1,143), followed by Institut National de la Sante et de la Recherche Medicale (INSERM) (693) and Harvard University (630). Co-occurrence map of institutions showed that scientific cooperation among institutions was greatly affected by the geographical location, and there are more cooperations among institutions in the same region. The analysis of countries and institutions. (a). Network of countries/territories engaged in calcium channel research; (b). Network of institutions engaged in calcium channel research.

Active journals

The 26,664 articles were published in 2,999 journals, 10 journals have published more than 250 articles in the calcium channel field. Table 2 lists the top 10 journals that published articles on calcium channel research. Plos One had the highest number at 986 (3.70%) (IF2019 = 2.776), followed by the journal of biological chemistry published 646 papers (2.42%) (IF2019 = 4.106) and the journal of neuroscience ranked third at 559 papers (2.10%) (IF2019 = 6.074).
Table 2.

The Top 10 journals that published articles on calcium channel research.

RankJournalFrequency (%)N = 2,999IF 2019Country Affiliation
1PLoS One986(3.70%)2.776United State
2The journal of biological chemistry646(2.42%)4.106United State
3Journal of neuroscience559(2.10%)6.074United State
4Scientific reports468(1.76%)4.011United State
5Proceedings of the National Academy of Sciences of the United States of America466(1.75%)9.580England
6Journal of Physiology-London399(1.50%)4.950England
7Cell Calcium374(1.40%)3.932Netherlands
8Biochemical and biophysical research communications283(1.06%)2.705United States
9European journal of pharmacology274(1.03%)3.170United States
10American journal of physiology.Cell physiology264(0.99%)3.553United States
The Top 10 journals that published articles on calcium channel research.

Active authors

Author co-occurrence map can provide information on influential research groups and potential collaborators. It can help researchers to find potential collaborators [14]. More than 90,000 authors contributed 26,664 articles related to calcium channel research. Figure 4 shows the network of authors contributed to calcium channel research, and the top 10 active authors are listed in Table 3. In the network of authors contributed to calcium channel research, the largest node was Lang, Florian (93articles) who mainly focused on suicidal erythrocyte death [15,16] and regulation of STIM1/Orai1-dependent Ca2+ signaling [17,18]. Zamponi, Gerald W was the second highly published author. His research focused on the regulation of calcium channels [19,20] and their roles in the nervous system [21,22].
Figure 4.

The network of authors contributed to calcium channel research.

Table 3.

The top10 active authors, in calcium channel research.

RankAuthorFreq
1Lang, Florian93
2Zamponi, Gerald W84
3Jan, Chung-Ren71
4Wei Wang53
5Naziroglu, Mustafa51
6Chou, Chiang-Ting49
7Liang, Wei-Zhe46
8Kuo, Chun-Chi42
9Birnbaumer, Lutz39
10Mori, Yasuo35
The network of authors contributed to calcium channel research. The top10 active authors, in calcium channel research.

Co-cited references

Twenty-six thousand six hundred sixty-four articles were visualized and analyzed using CiteSpace with a time span from 2010 to 2019, and a time slice of 1 was chosen for the analysis of the co-cited references. The network of co-cited references on calcium channels consists of references with higher centrality and citation counts which is presented in Figure 5. The highly cited references were analyzed to determine the key knowledge base in the field. The top 10 highest co-cited references are summarized in Table 4. Feske S, Liou J, Park CY, and Roos J mainly focused on STIM1 and CRACM1 (Orai1) regulating CRAC channels. Catterall WA, Parekh AB, and Clapham DE reviewed calcium channels and calcium signaling. Yang YD, Caputo A, and Schroeder BC mainly studied TMEM16A is a membrane protein associated with calcium-dependent chloride channel activity [23-25]. In2005, Roos J proposed that STIM1 played an essential role in Store-operated Ca2+ (SOC) channels [26]; Liou J’s study suggests that STIM proteins function as Ca2+ store sensors in the signaling pathway connecting Ca2+store depletion to Ca2+ influx [27]. In 2006 Feske S proposed that Orai1 is an essential component or regulator of the CRAC channel complex. Then in 2009, Park CY established the molecular mechanism for store-operated Ca2+ entry and found that the direct combination of STIM1 and Orai1 drives the accumulation and activation of CRAC channels at the endoplasmic reticulum – plasma membrane junctions. And thus these articles laid the foundation for the study of STIM1 and CRACM1 (Orai1) regulating CRAC channels. Clapham DE reviewed the principles of Ca2+ signal transduction in 2007 [1]. Parekh AB and Catterall WA reviewed store-operated calcium channels [28] and voltage-gated calcium channels [29]. These three reviews provided theoretical basis for the study of calcium channels. The highly co-cited references on TMEM16A were mainly published in 2008.
Figure 5.

The analysis of Co-cited references: Co-citation network of references from publications on calcium channel research.

Table 4.

The top10 Co-cited references (CR) in calcium channel research.

RankFreqAuthorYearSourceCo-cited Reference
1287Feske, S2006NatureA mutation in Orai1 causes immune deficiency by abrogating CRAC channel function
2283Catterall WA2011Cold Spring Harbor perspectives in biologyVoltage-gated calcium channels.
3237Liou J2005Current biology: CBSTIM is a Ca2+ sensor essential for Ca2+-store-depletion-triggered Ca2+ influx.
4237Yang YD2008natureTMEM16A confers receptor-activated calcium-dependent chloride conductance.
5233Parekh AB2005Physiological reviewsStore-operated calcium channels.
6230Caputo A2008scienceTMEM16A, a membrane protein associated with calcium-dependent chloride channel activity.
7228Schroeder BC2008cellExpression cloning of TMEM16A as a calcium-activated chloride channel subunit.
8214Park CY2009cellSTIM1 clusters and activates CRAC channels via direct binding of a cytosolic domain to Orai1.
9210Roos J2005The Journal of cell biologySTIM1, an essential and conserved component of store-operated Ca2+ channel function.
10209Clapham DE2007cellCalcium signaling.
The analysis of Co-cited references: Co-citation network of references from publications on calcium channel research. The top10 Co-cited references (CR) in calcium channel research.

Research area analysis

Figure 6 shows the top 15 research areas that appeared in publications related to calcium channel research from 2010 to 2019. Neurosciences, biochemistry and molecular biology, cell biology are the three areas where calcium channels are more studied.
Figure 6.

The 15 research areas on calcium channel research.

The 15 research areas on calcium channel research.

Keyword co-occurrence and burst

Keywords represent the main content of research. Keyword co-occurrence analysis provides a reasonable description of research hotspots, and burst keywords can represent research frontiers over a period of time [30]. CiteSpace 5.6.R5 were used to construct a knowledge map of keyword co-occurrence (Figure 7) and identified the top 20 keywords in calcium channel research articles from 2010 to 2019 (Table 5), according to frequency. The top keywords were “expression,” “activation,” “mechanism,” “cell,” “protein,” “receptor,” “calcium channel blocker,” “inhibition,” “rat,” “potassium channel,” “hypertension,” “in vitro,” “release,” “neuron,” “modulation,” “oxidative stress,” “apoptosis,” “nitric oxide,” “ryanodine receptor,” and “gene expression.”Therefore, research hotspots can be summarized in the following aspects:
Figure 7.

The analysis of keywords in calcium channel research.

Table 5.

Top 20 keywords in terms of frequency in potassium channel research.

RankKeywordFrequencyRankKeywordFrequency
1Expression286511Hypertension1058
2Activation279212In vitro1021
3Mechanism192213Release1014
4Cell160614neuron995
5Protein148415modulation978
6Receptor143916oxidative stress948
7Calcium channel blocker132617Apoptosis885
8Inhibition132418Nitric oxide880
9Rat119919Ryanodine receptor815
10Potassium channel105820Gene expression805
Top 20 keywords in terms of frequency in potassium channel research.

The regulation mechanism of calcium channels

As an important second messenger in cells, calcium ions are crucial in regulating various intracellular signaling pathways that control key cellular functions. Research on the regulation mechanism of calcium channels has always been a research hotspot, especially the research on [31] on STIM1 and CRACM1 (Orai1) regulating CRAC current. CRACM1(Orai1) is a pore subunit of the CRAC channel [32,33], and stromal interaction molecule 1 (STIM1) in the endoplasmic reticulum activates ORAI1-CRAC channels [34,35].

Calcium channel blockers

Calcium channel blockers are a class of drugs that selectively block voltage-dependent calcium channels and inhibit the flow of Ca2+ into cells, and their development is rapid. Calcium channel blockers can be divided into dihydropyridines, phenylalkylamines, benzothiazepines, flunarizine, prenylamine based on the chemical structure and pharmacological characteristics.

Ryanodine receptor

Ryanodine receptors (RyRs) are located in the sarcoplasmic/endoplasmic reticulum and are responsible for releasing Ca2+ from intracellular storage during excitation-contraction coupling, which is an important class of intracellular calcium release channel. RyRs are the largest known ion channels (>2MDa) and exist as three mammalian isoforms (RyR 1–3) [36]. The analysis of keywords in calcium channel research. Keywords were identified and analyzed using strong citation bursts (Table 6) to explore the frontiers of research. In Table 6, the red line indicates the time period during which the burst keyword appears [37]. As shown in Table 6, the keywords that had strong bursts after 2015 were “proliferation” (2015–2017), “mutation” (2016–2019), “neuropathic pain” (2017–2019), and “pathway” (2017–2019). The top four research frontiers of calcium channel research were as follows:
Table 6.

Top 8 keywords with the strongest citation bursts.

KeywordsYearStrengthBeginEnd2010–2019
Binding201019.021520102011
Smooth muscle cell201041.255420102013
Hippocampal neuron201053.993120102011
Protein kinase c201060.352520102012
Proliferation201012.685320152017
Mutation201038.286720162019
Neuropathic pain201060.202920172019
Pathway201048.393720172019
Top 8 keywords with the strongest citation bursts.

Effect of calcium channel on cell proliferation

There is increasing evidence that calcium channels are involved in the occurrence and development of tumors. Calcium channels play essential roles in various forms of cancer. Disturbance of Ca2+ homeostasis leads to canceration or tumor cell proliferation [38].

Gene mutation

Gene mutations encoding calcium channels lead to hereditary calcium channel disease. Studies have shown that CACNA1A gene mutations associated with some nervous system disease, such as familial hemiplegic migraine type 1, episodic ataxia type 2, and spinocerebellar ataxia type 6 [39]. Another study showed that mutations in the CACNA1 F gene could cause Aland Island eye disease [40].

Calcium channels in neuropathic pain

Cav3.2 calcium channel plays a vital role in the nociceptive signal transduction of primary afferent pain pathway [41]. One study showed that dysregulation of USP5 SUMOization after peripheral nerve injury might be an essential cause of changes in Cav3.2 channel activity under neuropathic pain [42].

Calcium signaling pathway

Changes in the primary and modulatory roles of calcium signaling are a contributory factor responsible for the onset of a large number human diseases [2]. The regulation mechanism of calcium-signaling pathway is still the frontier in calcium channel research.

Conclusions

Based on the WOSCC database, bibliometric and Visual analysis were used to study the characteristics of calcium channel research results from 2010 to 2019. Over the past decade, the number of publications on calcium channel remained stable high. The three hot spots of calcium channel research were the regulation mechanism of calcium channels, calcium channel blockers, and ryanodine receptor. The top four research frontiers were the effect of calcium channel on cell proliferation, gene mutation, calcium channels in neuropathic pain, and calcium signaling pathway. Bibliometric analysis of the literature on the calcium channels was important in allowing researchers to identify cooperations, find research hotspots, and predict the frontiers of calcium channel research.
  40 in total

1.  STIM is a Ca2+ sensor essential for Ca2+-store-depletion-triggered Ca2+ influx.

Authors:  Jen Liou; Man Lyang Kim; Won Do Heo; Joshua T Jones; Jason W Myers; James E Ferrell; Tobias Meyer
Journal:  Curr Biol       Date:  2005-07-12       Impact factor: 10.834

2.  Stimulation of Ca2+-channel Orai1/STIM1 by serum- and glucocorticoid-inducible kinase 1 (SGK1).

Authors:  Anja Eylenstein; Eva-Maria Gehring; Nicole Heise; Ekaterina Shumilina; Sebastian Schmidt; Kalina Szteyn; Patrick Münzer; Meerim K Nurbaeva; Melanie Eichenmüller; Leonid Tyan; Ivonne Regel; Michael Föller; Dietmar Kuhl; Jonathan Soboloff; Reinhold Penner; Florian Lang
Journal:  FASEB J       Date:  2011-03-08       Impact factor: 5.191

3.  STIM1 mutation associated with a syndrome of immunodeficiency and autoimmunity.

Authors:  Capucine Picard; Christie-Ann McCarl; Alexander Papolos; Sara Khalil; Kevin Lüthy; Claire Hivroz; Francoise LeDeist; Frédéric Rieux-Laucat; Gideon Rechavi; Anjana Rao; Alain Fischer; Stefan Feske
Journal:  N Engl J Med       Date:  2009-05-07       Impact factor: 91.245

4.  STIM1 signalling controls store-operated calcium entry required for development and contractile function in skeletal muscle.

Authors:  Jonathan Stiber; April Hawkins; Zhu-Shan Zhang; Sunny Wang; Jarrett Burch; Victoria Graham; Cary C Ward; Malini Seth; Elizabeth Finch; Nadia Malouf; R Sanders Williams; Jerry P Eu; Paul Rosenberg
Journal:  Nat Cell Biol       Date:  2008-05-18       Impact factor: 28.824

5.  Surface expression and function of Cav3.2 T-type calcium channels are controlled by asparagine-linked glycosylation.

Authors:  Norbert Weiss; Stefanie A G Black; Chris Bladen; Lina Chen; Gerald W Zamponi
Journal:  Pflugers Arch       Date:  2013-03-16       Impact factor: 3.657

6.  TMEM16A, a membrane protein associated with calcium-dependent chloride channel activity.

Authors:  Antonella Caputo; Emanuela Caci; Loretta Ferrera; Nicoletta Pedemonte; Cristina Barsanti; Elvira Sondo; Ulrich Pfeffer; Roberto Ravazzolo; Olga Zegarra-Moran; Luis J V Galietta
Journal:  Science       Date:  2008-09-04       Impact factor: 47.728

7.  TMEM16A confers receptor-activated calcium-dependent chloride conductance.

Authors:  Young Duk Yang; Hawon Cho; Jae Yeon Koo; Min Ho Tak; Yeongyo Cho; Won-Sik Shim; Seung Pyo Park; Jesun Lee; Byeongjun Lee; Byung-Moon Kim; Ramin Raouf; Young Ki Shin; Uhtaek Oh
Journal:  Nature       Date:  2008-08-24       Impact factor: 49.962

8.  A novel CACNA1F gene mutation causes Aland Island eye disease.

Authors:  Reetta Jalkanen; N Torben Bech-Hansen; Rose Tobias; Eeva-Marja Sankila; Maija Mäntyjärvi; Henrik Forsius; Albert de la Chapelle; Tiina Alitalo
Journal:  Invest Ophthalmol Vis Sci       Date:  2007-06       Impact factor: 4.799

9.  Bibliometric analysis of potassium channel research.

Authors:  Jingjing Shi; Shuqing Shi; Shuai Shi; Qiulei Jia; Guozhen Yuan; Yuguang Chu; Huan Wang; Yuanhui Hu; Hanming Cui
Journal:  Channels (Austin)       Date:  2020-12       Impact factor: 2.581

Review 10.  The Physiology, Pathology, and Pharmacology of Voltage-Gated Calcium Channels and Their Future Therapeutic Potential.

Authors:  Gerald W Zamponi; Joerg Striessnig; Alexandra Koschak; Annette C Dolphin
Journal:  Pharmacol Rev       Date:  2015-10       Impact factor: 25.468

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Authors:  Shiyun Li; Can Zhang; Zhirui Xu; Lihua Liang; Ye Tian; Long Li; Huaping Wu; Sheng Zhong
Journal:  Micromachines (Basel)       Date:  2022-07-30       Impact factor: 3.523

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