Literature DB >> 32649833

Electrostatic Effect of Functional Surfaces on the Activity of Adsorbed Enzymes: Simulations and Experiments.

He Zheng1, Sheng-Jiang Yang2, Yong-Chao Zheng1, Yan Cui1, Zhe Zhang1, Jin-Yi Zhong1, Jian Zhou2.   

Abstract

The efficient immobilization of haloalkane dehalogenase (DhaA) on carriers with retaining of its catalytic activity is essential for its application in environmental remediation. In this work, adsorption orientation and conformation of DhaA on different functional surfaces were investigated by computer simulations; meanwhile, the mechanism of varying the catalytic activity was also probed. The corresponding experiments were then carried out to verify the simulation results. (The simulations of DhaA on SAMs provided parallel insights into DhaA adsorption in carriers. Then, the theory-guided experiments were carried out to screen the best surface functional groups for DhaA immobilization.) The electrostatic interaction was considered as the main impact factor for the regulation of enzyme orientation, conformation, and enzyme bioactivity during DhaA adsorption. The synergy of overall conformation, enzyme substrate tunnel structural parameters, and distance between catalytic active sites and surfaces codetermined the catalytic activity of DhaA. Specifically, it was found that the positively charged surface with suitable surface charge density was helpful for the adsorption of DhaA and retaining its conformation and catalytic activity and was favorable for higher enzymatic catalysis efficiency in haloalkane decomposition and environmental remediation. The neutral, negatively charged surfaces and positively charged surfaces with high surface charge density always caused relatively larger DhaA conformation change and decreased catalytic activity. This study develops a strategy using a combination of simulation and experiment, which can be essential for guiding the rational design of the functionalization of carriers for enzyme adsorption, and provides a practical tool to rationally screen functional groups for the optimization of adsorbed enzyme functions on carriers. More importantly, the strategy is general and can be applied to control behaviors of different enzymes on functional carrier materials.

Entities:  

Keywords:  DhaA; enzyme activity; molecular simulation; protein adsorption; protein conformation

Mesh:

Substances:

Year:  2020        PMID: 32649833     DOI: 10.1021/acsami.0c08080

Source DB:  PubMed          Journal:  ACS Appl Mater Interfaces        ISSN: 1944-8244            Impact factor:   9.229


  3 in total

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Authors:  Maria T Bezem; Fredrik G Johannessen; Trond-André Kråkenes; Michael J Sailor; Aurora Martinez
Journal:  Mol Pharm       Date:  2021-01-08       Impact factor: 4.939

2.  First-Principles Simulation of Dielectric Function in Biomolecules.

Authors:  Puja Adhikari; Rudolf Podgornik; Bahaa Jawad; Wai-Yim Ching
Journal:  Materials (Basel)       Date:  2021-10-02       Impact factor: 3.623

3.  Strategies for Controlling the Spatial Orientation of Single Molecules Tethered on DNA Origami Templates Physisorbed on Glass Substrates: Intercalation and Stretching.

Authors:  Keitel Cervantes-Salguero; Austin Biaggne; John M Youngsman; Brett M Ward; Young C Kim; Lan Li; John A Hall; William B Knowlton; Elton Graugnard; Wan Kuang
Journal:  Int J Mol Sci       Date:  2022-07-12       Impact factor: 6.208

  3 in total

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