Literature DB >> 32648692

Single Cell Transcriptomes Derived from Human Cervical and Uterine Tissue during Pregnancy.

Winston Koh1,2, Angela Wu3, Lolita Penland1, Barbara Treutlein1, Norma F Neff1, Gary L Mantalas1, Yair J Blumenfeld4, Yasser Y El-Sayed4, David K Stevenson5, Gary M Shaw5, Stephen R Quake1.   

Abstract

This work presents the workflow for generating single cell transcriptomes derived from primary human uterine and cervical tissue obtained during planned cesarean hysterectomies. In total, a catalogue of 310 single cell transcriptomes are obtained, cell types present in these biopsies are inferred, and specific genes defining each of the cellular types present in the tissue are identified. Further validation of the inferred cell identity is also demonstrated via meta-analysis of independent repositories in literature generated by bulk sequenced data of fluorescence-activated cell sorting sorted cells.
© 2019 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  pregnancy; single cell RNA-seq

Year:  2019        PMID: 32648692     DOI: 10.1002/adbi.201800336

Source DB:  PubMed          Journal:  Adv Biosyst        ISSN: 2366-7478


  3 in total

Review 1.  Single-Cell Immunobiology of the Maternal-Fetal Interface.

Authors:  Derek Miller; Valeria Garcia-Flores; Roberto Romero; Jose Galaz; Roger Pique-Regi; Nardhy Gomez-Lopez
Journal:  J Immunol       Date:  2022-10-15       Impact factor: 5.426

2.  Mass cytometry and transcriptomic profiling reveal body-wide pathology induced by Loxl1 deficiency.

Authors:  Yu Li; Bingbing Wu; Chengrui An; Deming Jiang; Lin Gong; Yanshan Liu; Yixiao Liu; Jun Li; Hongwei Ouyang; XiaoHui Zou
Journal:  Cell Prolif       Date:  2021-06-09       Impact factor: 6.831

3.  SFRP4+ stromal cell subpopulation with IGF1 signaling in human endometrial regeneration.

Authors:  Bingbing Wu; Yu Li; Nanfang Nie; Xilin Shen; Wei Jiang; Yanshan Liu; Lin Gong; Chengrui An; Kun Zhao; Xudong Yao; Chunhui Yuan; Jinghui Hu; Wei Zhao; Jianhua Qian; XiaoHui Zou
Journal:  Cell Discov       Date:  2022-09-27       Impact factor: 38.079

  3 in total

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