Literature DB >> 32646190

Mie Scatter and Interfacial Tension Based Real-Time Quantification of Colloidal Emulsion Nucleic Acid Amplification.

Ariana M Nicolini1, Tyler D Toth1, Samuel Y Kim1, M Alejandra Mandel2, David W Galbraith2, Jeong-Yeol Yoon1.   

Abstract

This work demonstrates for the first time rapid, real-time Mie scatter sensing of colloidal emulsion nucleic acid amplification directly from emulsion droplets. Loop-mediated isothermal amplification is used in this study, and, to our knowledge, has not previously been used in a colloidal emulsion platform. Interfacial tension values (γ) associated with bulk protein adsorption and denaturation at the oil-water interface exhibit characteristic changes in the absence or presence of amplification. In the presence of target and amplicon, emulsions maintain a constant 300-400 nm diameter, whereas emulsions formed with no target control show a rapid decrease in droplet diameter to <100 nm over the first 20 min of incubation. This method is validated using whole bacteria (Staphylococcus aureus MSSA and Escherichia coli O157:H7) and whole virus (Potato virus Y and Zika virus) samples suspended in water, buffer, or serum-like matrices. Short-term formation of colloidal emulsion is quantified via 60° scatter monitoring, where the initial slope of scattering intensity is utilized to confirm target amplification in less than 5 min. The unique benefits of this method render it more cost-effective and field-deployable than existing methods, while being adaptable to a multitude of targets, sample matrices, and nucleic acid amplification tests.
© 2017 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  LAMP; Mie scatter; loop-mediated isothermal amplification; real-time quantification; w/o emulsions

Year:  2017        PMID: 32646190     DOI: 10.1002/adbi.201700098

Source DB:  PubMed          Journal:  Adv Biosyst        ISSN: 2366-7478


  2 in total

1.  Contamination-resistant, rapid emulsion-based isothermal nucleic acid amplification with Mie-scatter inspired light scatter analysis for bacterial identification.

Authors:  Alexander S Day; Tiffany-Heather Ulep; Elizabeth Budiman; Laurel Dieckhaus; Babak Safavinia; Tyler Hertenstein; Jeong-Yeol Yoon
Journal:  Sci Rep       Date:  2021-10-07       Impact factor: 4.379

Review 2.  Progression of LAMP as a Result of the COVID-19 Pandemic: Is PCR Finally Rivaled?

Authors:  Cassidy Mannier; Jeong-Yeol Yoon
Journal:  Biosensors (Basel)       Date:  2022-07-06
  2 in total

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