Literature DB >> 32640929

The Genetic Control of Stoichiometry Underlying Autism.

Robert B Darnell1.   

Abstract

Autism is a common and complex neurologic disorder whose scientific underpinnings have begun to be established in the past decade. The essence of this breakthrough has been a focus on families, where genetic analyses are strongest, versus large-scale, case-control studies. Autism genetics has progressed in parallel with technology, from analyses of copy number variation to whole-exome sequencing (WES) and whole-genome sequencing (WGS). Gene mutations causing complete loss of function account for perhaps one-third of cases, largely detected through WES. This limitation has increased interest in understanding the regulatory variants of genes that contribute in more subtle ways to the disorder. Strategies combining biochemical analysis of gene regulation, WGS analysis of the noncoding genome, and machine learning have begun to succeed. The emerging picture is that careful control of the amounts of transcription, mRNA, and proteins made by key brain genes-stoichiometry-plays a critical role in defining the clinical features of autism.

Entities:  

Keywords:  FMRP; RNA; stoichiometry; synaptic plasticity; translation

Mesh:

Year:  2020        PMID: 32640929      PMCID: PMC7593886          DOI: 10.1146/annurev-neuro-100119-024851

Source DB:  PubMed          Journal:  Annu Rev Neurosci        ISSN: 0147-006X            Impact factor:   12.449


  157 in total

Review 1.  mRNA transport & local translation in neurons.

Authors:  Caspar Glock; Maximilian Heumüller; Erin M Schuman
Journal:  Curr Opin Neurobiol       Date:  2017-06-17       Impact factor: 6.627

2.  Altered synaptic plasticity in a mouse model of fragile X mental retardation.

Authors:  Kimberly M Huber; Sean M Gallagher; Stephen T Warren; Mark F Bear
Journal:  Proc Natl Acad Sci U S A       Date:  2002-05-28       Impact factor: 11.205

3.  Association of Microtubule Dynamics with Chronic Epilepsy.

Authors:  Xin Xu; Yida Hu; Yan Xiong; Zhonggui Li; Wei Wang; Chao Du; Yong Yang; Yanke Zhang; Fei Xiao; Xuefeng Wang
Journal:  Mol Neurobiol       Date:  2015-09-16       Impact factor: 5.590

4.  Genome-wide de novo risk score implicates promoter variation in autism spectrum disorder.

Authors:  Joon-Yong An; Kevin Lin; Lingxue Zhu; Donna M Werling; Shan Dong; Harrison Brand; Harold Z Wang; Xuefang Zhao; Grace B Schwartz; Ryan L Collins; Benjamin B Currall; Claudia Dastmalchi; Jeanselle Dea; Clif Duhn; Michael C Gilson; Lambertus Klei; Lindsay Liang; Eirene Markenscoff-Papadimitriou; Sirisha Pochareddy; Nadav Ahituv; Joseph D Buxbaum; Hilary Coon; Mark J Daly; Young Shin Kim; Gabor T Marth; Benjamin M Neale; Aaron R Quinlan; John L Rubenstein; Nenad Sestan; Matthew W State; A Jeremy Willsey; Michael E Talkowski; Bernie Devlin; Kathryn Roeder; Stephan J Sanders
Journal:  Science       Date:  2018-12-14       Impact factor: 47.728

5.  Association of Genetic and Environmental Factors With Autism in a 5-Country Cohort.

Authors:  Dan Bai; Benjamin Hon Kei Yip; Gayle C Windham; Andre Sourander; Richard Francis; Rinat Yoffe; Emma Glasson; Behrang Mahjani; Auli Suominen; Helen Leonard; Mika Gissler; Joseph D Buxbaum; Kingsley Wong; Diana Schendel; Arad Kodesh; Michaeline Breshnahan; Stephen Z Levine; Erik T Parner; Stefan N Hansen; Christina Hultman; Abraham Reichenberg; Sven Sandin
Journal:  JAMA Psychiatry       Date:  2019-10-01       Impact factor: 21.596

6.  Defining the regulatory network of the tissue-specific splicing factors Fox-1 and Fox-2.

Authors:  Chaolin Zhang; Zuo Zhang; John Castle; Shuying Sun; Jason Johnson; Adrian R Krainer; Michael Q Zhang
Journal:  Genes Dev       Date:  2008-09-15       Impact factor: 11.361

7.  The neuronal RNA-binding protein Nova-2 is implicated as the autoantigen targeted in POMA patients with dementia.

Authors:  Y Y Yang; G L Yin; R B Darnell
Journal:  Proc Natl Acad Sci U S A       Date:  1998-10-27       Impact factor: 11.205

8.  Sporadic autism exomes reveal a highly interconnected protein network of de novo mutations.

Authors:  Brian J O'Roak; Laura Vives; Santhosh Girirajan; Emre Karakoc; Niklas Krumm; Bradley P Coe; Roie Levy; Arthur Ko; Choli Lee; Joshua D Smith; Emily H Turner; Ian B Stanaway; Benjamin Vernot; Maika Malig; Carl Baker; Beau Reilly; Joshua M Akey; Elhanan Borenstein; Mark J Rieder; Deborah A Nickerson; Raphael Bernier; Jay Shendure; Evan E Eichler
Journal:  Nature       Date:  2012-04-04       Impact factor: 49.962

9.  Structure-function studies of FMRP RGG peptide recognition of an RNA duplex-quadruplex junction.

Authors:  Anh Tuân Phan; Vitaly Kuryavyi; Jennifer C Darnell; Alexander Serganov; Ananya Majumdar; Serge Ilin; Tanya Raslin; Anna Polonskaia; Cynthia Chen; David Clain; Robert B Darnell; Dinshaw J Patel
Journal:  Nat Struct Mol Biol       Date:  2011-06-05       Impact factor: 15.369

10.  BET protein Brd4 activates transcription in neurons and BET inhibitor Jq1 blocks memory in mice.

Authors:  Erica Korb; Margo Herre; Ilana Zucker-Scharff; Robert B Darnell; C David Allis
Journal:  Nat Neurosci       Date:  2015-08-24       Impact factor: 24.884

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  5 in total

1.  FMRP regulates mRNAs encoding distinct functions in the cell body and dendrites of CA1 pyramidal neurons.

Authors:  Caryn R Hale; Kirsty Sawicka; Kevin Mora; John J Fak; Jin Joo Kang; Paula Cutrim; Katarzyna Cialowicz; Thomas S Carroll; Robert B Darnell
Journal:  Elife       Date:  2021-12-23       Impact factor: 8.140

2.  Reduced Expression of Cerebral Metabotropic Glutamate Receptor Subtype 5 in Men with Fragile X Syndrome.

Authors:  James R Brašić; Ayon Nandi; David S Russell; Danna Jennings; Olivier Barret; Anil Mathur; Keith Slifer; Thomas Sedlak; Samuel D Martin; Zabecca Brinson; Pankhuri Vyas; John P Seibyl; Elizabeth M Berry-Kravis; Dean F Wong; Dejan B Budimirovic
Journal:  Brain Sci       Date:  2020-11-24

3.  An mtDNA mutant mouse demonstrates that mitochondrial deficiency can result in autism endophenotypes.

Authors:  Tal Yardeni; Ana G Cristancho; Almedia J McCoy; Patrick M Schaefer; Meagan J McManus; Eric D Marsh; Douglas C Wallace
Journal:  Proc Natl Acad Sci U S A       Date:  2021-02-09       Impact factor: 11.205

4.  Signature of Glycylglutamic Acid Structure.

Authors:  Amanda Hoff; Nigam Rath; John Lisko; Matthias Zeller; Ganesaratnam K Balendiran
Journal:  Int J Biochem Biophys (Alhambra)       Date:  2021-06

5.  Cerebral Expression of Metabotropic Glutamate Receptor Subtype 5 in Idiopathic Autism Spectrum Disorder and Fragile X Syndrome: A Pilot Study.

Authors:  James Robert Brašić; Ayon Nandi; David S Russell; Danna Jennings; Olivier Barret; Samuel D Martin; Keith Slifer; Thomas Sedlak; John P Seibyl; Dean F Wong; Dejan B Budimirovic
Journal:  Int J Mol Sci       Date:  2021-03-11       Impact factor: 5.923

  5 in total

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