Literature DB >> 32640435

Automatic multi-needle localization in ultrasound images using large margin mask RCNN for ultrasound-guided prostate brachytherapy.

Yupei Zhang1, Zhen Tian, Yang Lei, Tonghe Wang, Pretesh Patel, Ashesh B Jani, Walter J Curran, Tian Liu, Xiaofeng Yang.   

Abstract

Multi-needle localization in ultrasound (US) images is a crucial step of treatment planning for US-guided prostate brachytherapy. However, current computer-aided technologies are mostly focused on single-needle digitization, while manual digitization is labor intensive and time consuming. In this paper, we proposed a deep learning-based workflow for fast automatic multi-needle digitization, including needle shaft detection and needle tip detection. The major workflow is composed of two components: a large margin mask R-CNN model (LMMask R-CNN), which adopts the lager margin loss to reformulate Mask R-CNN for needle shaft localization, and a needle based density-based spatial clustering of application with noise algorithm which integrates priors to model a needle in an iteration for a needle shaft refinement and tip detections. Besides, we use the skipping connection in neural network architecture to improve the supervision in hidden layers. Our workflow was evaluated on 23 patients who underwent US-guided high-dose-rate (HDR) prostrate brachytherapy with 339 needles being tested in total. Our method detected 98% of the needles with 0.091 ± 0.043 mm shaft error and 0.330 ± 0.363 mm tip error. Compared with only using Mask R-CNN and only using LMMask R-CNN, the proposed method gains a significant improvement on both shaft error and tip error. The proposed method automatically digitizes needles per patient with in a second. It streamlines the workflow of transrectal ultrasound-guided HDR prostate brachytherapy and paves the way for the development of real-time treatment planning system that is expected to further elevate the quality and outcome of HDR prostate brachytherapy.

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Year:  2020        PMID: 32640435     DOI: 10.1088/1361-6560/aba410

Source DB:  PubMed          Journal:  Phys Med Biol        ISSN: 0031-9155            Impact factor:   3.609


  5 in total

1.  MRI-based prostate and dominant lesion segmentation using cascaded scoring convolutional neural network.

Authors:  Zachary A Eidex; Tonghe Wang; Yang Lei; Marian Axente; Oladunni O Akin-Akintayo; Olayinka A Abiodun Ojo; Akinyemi A Akintayo; Justin Roper; Jeffery D Bradley; Tian Liu; David M Schuster; Xiaofeng Yang
Journal:  Med Phys       Date:  2022-05-17       Impact factor: 4.506

Review 2.  A review of deep learning based methods for medical image multi-organ segmentation.

Authors:  Yabo Fu; Yang Lei; Tonghe Wang; Walter J Curran; Tian Liu; Xiaofeng Yang
Journal:  Phys Med       Date:  2021-05-13       Impact factor: 2.685

3.  Deep Learning-Based Chest CT Image Features in Diagnosis of Lung Cancer.

Authors:  Jianxin Feng; Jun Jiang
Journal:  Comput Math Methods Med       Date:  2022-01-19       Impact factor: 2.238

4.  Deep learning-based digitization of prostate brachytherapy needles in ultrasound images.

Authors:  Christoffer Andersén; Tobias Rydén; Per Thunberg; Jakob H Lagerlöf
Journal:  Med Phys       Date:  2020-10-27       Impact factor: 4.071

5.  Measurement of laryngeal elevation by automated segmentation using Mask R-CNN.

Authors:  Hyun Haeng Lee; Bo Mi Kwon; Cheng-Kun Yang; Chao-Yuan Yeh; Jongmin Lee
Journal:  Medicine (Baltimore)       Date:  2021-12-23       Impact factor: 1.817

  5 in total

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