| Literature DB >> 32637468 |
Mats Bue1,2,3, Natasja Leth Bergholt1, Louise Kruse Jensen4, Henrik Elvang Jensen4, Kjeld Søballe1,2,3, Maiken Stilling1,2,3, Pelle Hanberg1,2,5.
Abstract
OBJECTIVE: To explore the in situ inflammatory proteins in the local extracellular fluid of infected bone tissue.Entities:
Keywords: Fluid space of bone; Inflammatory proteins in infected bone tissue; Microdialysis; Osteomyelitis porcine model; Proximity extension assay
Year: 2020 PMID: 32637468 PMCID: PMC7330156 DOI: 10.1016/j.bonr.2020.100292
Source DB: PubMed Journal: Bone Rep ISSN: 2352-1872
Fig. 1Key proteins of interest from the microdialysates and plasma. (A) Selected proteins of interest based on measured microdialysate freq. or measured plasma freq. (a) One-way ANOVA comparison between microdialysate and plasma. p-values <.05 were considered significant. (b) Not available information (n/a). (B) Principal component analysis (PCA) of microdialysate and plasma samples. Analysis was based on NPXs of all proteins for each individual samples (smaller dots). The ellipses indicate the percentage of variability by PC1 and PC2 using all individual samples for a given group. The colored ellipses denote 95% confidence intervals for the different groups. Each axis is labeled with the percent total variance. The two labels correspond to microdialysates (red) and plasma (blue). (C) Biological interaction of proteins measured in both microdialysates and plasma. Each description directs to a GO enrichment search p-value, involved partners, and GO terms. (D) Graphic representation of proteins identified to have a connection within both groups. The same coloring indicates stronger relation. Data are extracted from STRING version 10.5 (String-db.org). Protein and gene abbreviation of proteins with p-values <.05; T-cell surface glycoprotein Cd6 isoform, CD6; interleukin-1 alpha, IL-1 alpha; fibroblast growth factor 23, FGF-23; vascular endothelia growth factor A, VEGF-A; urokinase-type plasminogen activator, uPA (PLAU); monocyte chemotactic protein 1, MCP-1; cystatin D, CST5; delta and notch-like epidermal growth factor-related receptor, DNER; protein S100-A12, EN-RAGE (S100A12); transforming growth factor alpha, TGF-alpha (TGFA); matrix metalloproteinase-1, MMP-1; fibroblast growth factor 21, FGF-21; osteoprotegrin, OPG (TNFRSF11B).
Fig. 2Normalized protein expression (NPX) of specific proteins associated with inflammation. Vertical axes represent arbitrary Log-2 scaled NPX. Horizontal axes represent specific proteins from microdialysate and plasma. p-values <.05 are listed in Fig. 1A.
Fig. 3Key proteins of interest for healthy and infected recipients and in bone. (A) Proteins registered with a percentage of incidence >20 percentage for healthy and infected recipients, and healthy and infected bone (B) Principal component analysis (PCA) of the five compartments; healthy cancellous bone, healthy subcutaneous tissue, infected cancellous bone, infected subcutaneous tissue, and the implant cavity. Analysis was based on NPXs of all proteins for each individual sample (smaller dots). The ellipses indicate the percentage of variability by PC1 and PC2 using all individual samples for a given group. The colored ellipses denote 95% confidence intervals for the different groups. Each axis is labeled with the percent total variance. The five labels correspond to healthy cancellous bone (red), healthy subcutaneous tissue (yellow), infected cancellous bone (green), infected subcutaneous tissue (blue), and the implant cavity (pink). (C) NPX of specific proteins associated with angiogenesis for healthy cancellous bone and the infected bone compartments. Vertical axes represent arbitrary Log-2 scaled NPX. Horizontal axes represent specific proteins from Healthy or infected Bone. p-values <.05 are considered significant.