Literature DB >> 32633523

Elucidating the Proton Transport Pathways in Liquid Imidazole with First-principles Molecular Dynamics.

Zhuoran Long, Austin O Atsango, Joseph A Napoli, Thomas E Markland, Mark E Tuckerman.   

Abstract

Imidazole is a promising anhydrous proton conductor with a high conductivity comparable to that of water at a similar temperature relative to its melting point. Previous theoretical studies of the mechanism of proton transport in imidazole have relied either on empirical models or on ab initio trajectories that have been too short to draw significant conclusions. Here, we present the results of ab initio molecular dynamics simulations of an excess proton in liquid imidazole reaching 1 nanosecond in total simulation time. We find that the proton transport is dominated by structural diffusion, with the diffusion constant of the proton defect $\sim$8 times higher than the self-diffusion of the imidazole molecules. By using correlation function analysis, we decompose the mechanism for proton transport into a series of first-order processes and show that the proton transport mechanism occurs over three distinct time and length scales. Although the mechanism at intermediate times is dominated by hopping along pseudo one-dimensional chains at longer times, the overall rate of diffusion is limited by the reformation of these chains, thus providing a more complete picture of the traditional an idealized Grotthuss structural diffusion mechanism.

Entities:  

Year:  2020        PMID: 32633523     DOI: 10.1021/acs.jpclett.0c01744

Source DB:  PubMed          Journal:  J Phys Chem Lett        ISSN: 1948-7185            Impact factor:   6.475


  4 in total

1.  Understanding Proton Transfer in Non-aqueous Biopolymers based on Helical Peptides: A Quantum Mechanical Study.

Authors:  Jiang Bian; Anthony Cruz; Gabriel López-Morales; Anton Kyrylenko; Donna McGregor; Gustavo E López
Journal:  Int J Quantum Chem       Date:  2022-06-21       Impact factor: 2.437

2.  Quantum mechanical effects in acid-base chemistry.

Authors:  Xiaoliu Zhang; Shengmin Zhou; Fedra M Leonik; Lu Wang; Daniel G Kuroda
Journal:  Chem Sci       Date:  2022-05-19       Impact factor: 9.969

3.  Evolution of microscopic heterogeneity and dynamics in choline chloride-based deep eutectic solvents.

Authors:  Stephanie Spittle; Derrick Poe; Brian Doherty; Charles Kolodziej; Luke Heroux; Md Ashraful Haque; Henry Squire; Tyler Cosby; Yong Zhang; Carla Fraenza; Sahana Bhattacharyya; Madhusudan Tyagi; Jing Peng; Ramez A Elgammal; Thomas Zawodzinski; Mark Tuckerman; Steve Greenbaum; Burcu Gurkan; Clemens Burda; Mark Dadmun; Edward J Maginn; Joshua Sangoro
Journal:  Nat Commun       Date:  2022-01-11       Impact factor: 14.919

4.  Monitoring the photochemistry of a formazan over 15 orders of magnitude in time.

Authors:  Svenja Wortmann; Roger Jan Kutta; Patrick Nuernberger
Journal:  Front Chem       Date:  2022-09-28       Impact factor: 5.545

  4 in total

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