Literature DB >> 32632354

Toward Automated Inventory Modeling in Life Cycle Assessment: The Utility of Semantic Data Modeling to Predict Real-World Chemical Production.

Vinit K Mittal1, Sidney C Bailin2, Michael A Gonzalez3, David E Meyer3, William M Barrett3, Raymond L Smith3.   

Abstract

A set of coupled semantic data models, i.e., ontologies, are presented to advance a methodology toward automated inventory modeling of chemical manufacturing in life cycle assessment. The cradle-to-gate life cycle inventory for chemical manufacturing is a detailed collection of the material and energy flows associated with a chemical's supply chain. Thus, there is a need to manage data describing both the lineage (or synthesis pathway) and processing conditions for a chemical. To this end, a Lineage ontology is proposed to reveal all the synthesis steps required to produce a chemical from raw materials, such as crude oil or biomaterials, while a Process ontology is developed to manage data describing the various unit processes associated with each synthesis step. The two ontologies are coupled such that process data, which is the basis for inventory modeling, is linked to lineage data through key concepts like the chemical reaction and reaction participants. To facilitate automated inventory modeling, a series of SPARQL queries, based on the concepts of ancestor and parent, are presented to generate a lineage for a chemical of interest from a set of reaction data. The proposed ontologies and SPARQL queries are evaluated and tested using a case study of nylon-6 production. Once a lineage is established, the process ontology can be used to guide inventory modeling based on both data mining (top-down) and simulation (bottom-up) approaches. The ability to generate a cradle-to-gate life cycle for a chemical represents a key achievement toward the ultimate goal of automated life cycle inventory modeling.

Entities:  

Keywords:  Life cycle assessment; Life cycle inventory; Lineage; Ontology; Process; Semantic data model

Year:  2017        PMID: 32632354      PMCID: PMC7336534          DOI: 10.1021/acssuschemeng.7b03379

Source DB:  PubMed          Journal:  ACS Sustain Chem Eng        ISSN: 2168-0485            Impact factor:   8.198


  13 in total

1.  Design and development of chemical ontologies for reaction representation.

Authors:  Punnaivanam Sankar; Gnanasekaran Aghila
Journal:  J Chem Inf Model       Date:  2006 Nov-Dec       Impact factor: 4.956

2.  Coupling Computer-Aided Process Simulation and Estimations of Emissions and Land Use for Rapid Life Cycle Inventory Modeling.

Authors:  Raymond L Smith; Gerardo J Ruiz-Mercado; David E Meyer; Michael A Gonzalez; John P Abraham; William M Barrett; Paul M Randall
Journal:  ACS Sustain Chem Eng       Date:  2017       Impact factor: 8.198

3.  Parallel optimization of synthetic pathways within the network of organic chemistry.

Authors:  Mikołaj Kowalik; Chris M Gothard; Aaron M Drews; Nosheen A Gothard; Alex Weckiewicz; Patrick E Fuller; Bartosz A Grzybowski; Kyle J M Bishop
Journal:  Angew Chem Int Ed Engl       Date:  2012-07-13       Impact factor: 15.336

4.  Mining Available Data from the United States Environmental Protection Agency to Support Rapid Life Cycle Inventory Modeling of Chemical Manufacturing.

Authors:  Sarah A Cashman; David E Meyer; Ashley N Edelen; Wesley W Ingwersen; John P Abraham; William M Barrett; Michael A Gonzalez; Paul M Randall; Gerardo Ruiz-Mercado; Raymond L Smith
Journal:  Environ Sci Technol       Date:  2016-08-26       Impact factor: 9.028

Review 5.  Computer-Assisted Synthetic Planning: The End of the Beginning.

Authors:  Sara Szymkuć; Ewa P Gajewska; Tomasz Klucznik; Karol Molga; Piotr Dittwald; Michał Startek; Michał Bajczyk; Bartosz A Grzybowski
Journal:  Angew Chem Int Ed Engl       Date:  2016-04-08       Impact factor: 15.336

6.  No electron left behind: a rule-based expert system to predict chemical reactions and reaction mechanisms.

Authors:  Jonathan H Chen; Pierre Baldi
Journal:  J Chem Inf Model       Date:  2009-09       Impact factor: 4.956

7.  The chemical information ontology: provenance and disambiguation for chemical data on the biological semantic web.

Authors:  Janna Hastings; Leonid Chepelev; Egon Willighagen; Nico Adams; Christoph Steinbeck; Michel Dumontier
Journal:  PLoS One       Date:  2011-10-03       Impact factor: 3.240

8.  Neural Networks for the Prediction of Organic Chemistry Reactions.

Authors:  Jennifer N Wei; David Duvenaud; Alán Aspuru-Guzik
Journal:  ACS Cent Sci       Date:  2016-10-14       Impact factor: 14.553

9.  Prediction of Organic Reaction Outcomes Using Machine Learning.

Authors:  Connor W Coley; Regina Barzilay; Tommi S Jaakkola; William H Green; Klavs F Jensen
Journal:  ACS Cent Sci       Date:  2017-04-18       Impact factor: 14.553

10.  ChEBI: a database and ontology for chemical entities of biological interest.

Authors:  Kirill Degtyarenko; Paula de Matos; Marcus Ennis; Janna Hastings; Martin Zbinden; Alan McNaught; Rafael Alcántara; Michael Darsow; Mickaël Guedj; Michael Ashburner
Journal:  Nucleic Acids Res       Date:  2007-10-11       Impact factor: 16.971

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  1 in total

1.  Linking Molecular Structure via Functional Group to Chemical Literature for Establishing a Reaction Lineage for Application to Alternatives Assessment.

Authors:  William M Barrett; Sudhakar Takkellapati; Kidus Tadele; Todd M Martin; Michael A Gonzalez
Journal:  ACS Sustain Chem Eng       Date:  2019-04-15       Impact factor: 8.198

  1 in total

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