Literature DB >> 32621550

A framework for simplification of quantitative systems pharmacology models in clinical pharmacology.

Abdallah Derbalah1, Hesham Al-Sallami1, Chihiro Hasegawa1, Abhishek Gulati2, Stephen B Duffull1.   

Abstract

Quantitative systems pharmacology (QSP) is a relatively new discipline within modelling and simulation that has gained wide attention over the past few years. The application of QSP models spans drug-target identification and validation, through all drug development phases as well as clinical applications. Due to their detailed mechanistic nature, QSP models are capable of extrapolating knowledge to predict outcomes in scenarios that have not been tested experimentally, making them an important resource in experimental and clinical pharmacology. However, these models are complicated to work with due to their size and inherent complexity. This makes many applications of QSP models for simulation, parameter estimation and trial design computationally intractable. A number of techniques have been developed to simplify QSP models into smaller models that are more amenable to further analyses while retaining their accurate predictive capabilities. Different simplification techniques have different strengths and weaknesses and hence different utilities. Understanding the utilities of different methods is essential for selection of the best method for a particular situation. In this paper, we have created an overall framework for model simplification techniques that allows a natural categorisation of methods based on their utility. We provide a brief description of the concept underpinning the different methods and example applications. A summary of the utilities of methods is intended to provide a guide to modellers in their model endeavours to simplify these complicated models.
© 2020 British Pharmacological Society.

Entities:  

Keywords:  complexity; model-order reduction; pharmacological models; quantitative systems pharmacology

Mesh:

Year:  2020        PMID: 32621550     DOI: 10.1111/bcp.14451

Source DB:  PubMed          Journal:  Br J Clin Pharmacol        ISSN: 0306-5251            Impact factor:   4.335


  6 in total

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3.  Reduction of quantitative systems pharmacology models using artificial neural networks.

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5.  Potential Issues With Virtual Populations When Applied to Nonlinear Quantitative Systems Pharmacology Models.

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Review 6.  Two heads are better than one: current landscape of integrating QSP and machine learning : An ISoP QSP SIG white paper by the working group on the integration of quantitative systems pharmacology and machine learning.

Authors:  Tongli Zhang; Ioannis P Androulakis; Peter Bonate; Limei Cheng; Tomáš Helikar; Jaimit Parikh; Christopher Rackauckas; Kalyanasundaram Subramanian; Carolyn R Cho
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  6 in total

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