Literature DB >> 32621146

Pangolin Indexing System: implications in forensic surveillance of large seizures.

Abhishek Singh1,2, Prajnashree Priyambada1,3, Gul Jabin1,3, Sujeet Kumar Singh1, Bheem Dutt Joshi1, Chinnadurai Venkatraman1, Kailash Chandra1, Lalit Kumar Sharma1, Mukesh Thakur4.   

Abstract

Demand for pangolin scales in East Asia has increased dramatically in the past two decades, raising concern to the pangolin survival and bringing them to the brink of local extinction. Enumerating the number of individuals from the seized pangolin scales primarily goes undocumented, mostly due to the unavailability of the appropriate methods. In this study, we developed a Pangolin Indexing System, a multi-locus STR panel of eight dinucleotide microsatellites that showed promising results in individualization and assignment of scales into Chinese and Indian pangolins. The combined power of exclusion was 0.83 and 0.99 for Chinese and Indian pangolin. The select panel of eight polymorphic STRs exhibited the cumulative probability of identity 3.7 × 10-9 for Indian pangolin and 3.6 × 10-7 for Chinese pangolin and identified 51 unique genotypes from the 74 scales selected from the four pangolin seizures. The study demonstrated the first report of cross-species validation of STRs developed from Malayan pangolin to Indian pangolin and showed the potential application of Pangolin Indexing System in screening of large seizures through DNA profiling from the scales of Indian and Chinese pangolin.

Entities:  

Keywords:  Manis crassicaudata; Manis pentadactyla; Multi-locus genotyping; Pangolin Indexing System; Pangolin scales; STR

Mesh:

Year:  2020        PMID: 32621146     DOI: 10.1007/s00414-020-02362-5

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  15 in total

1.  STRAF-A convenient online tool for STR data evaluation in forensic genetics.

Authors:  Alexandre Gouy; Martin Zieger
Journal:  Forensic Sci Int Genet       Date:  2017-07-15       Impact factor: 4.882

2.  ESTIMATING RELATEDNESS USING GENETIC MARKERS.

Authors:  David C Queller; Keith F Goodnight
Journal:  Evolution       Date:  1989-03       Impact factor: 3.694

3.  The Complete Phylogeny of Pangolins: Scaling Up Resources for the Molecular Tracing of the Most Trafficked Mammals on Earth.

Authors:  Philippe Gaubert; Agostinho Antunes; Hao Meng; Lin Miao; Stéphane Peigné; Fabienne Justy; Flobert Njiokou; Sylvain Dufour; Emmanuel Danquah; Jayanthi Alahakoon; Erik Verheyen; William T Stanley; Stephen J O'Brien; Warren E Johnson; Shu-Jin Luo
Journal:  J Hered       Date:  2018-05-11       Impact factor: 2.645

4.  Development of a multiplex, PCR-based genotyping assay for African and Asian elephants for forensic purposes.

Authors:  Margret J Potoczniak; Michael Chermak; Lawrence Quarino; Shanan S Tobe; Jillian Conte
Journal:  Int J Legal Med       Date:  2019-06-12       Impact factor: 2.686

5.  [Allometry of scales in Chinese pangolins (Manis pentadactyla) and Malayan pangolins (Manis javanica) and application in judicial expertise].

Authors:  Zhao-Min Zhou; Hong Zhao; Zhong-Xu Zhang; Ze-Hui Wang; Han Wang
Journal:  Dongwuxue Yanjiu       Date:  2012-06

6.  In vivo relaxation of N-acetyl-aspartate, creatine plus phosphocreatine, and choline containing compounds during the course of brain infarction: a proton MRS study.

Authors:  P Gideon; O Henriksen
Journal:  Magn Reson Imaging       Date:  1992       Impact factor: 2.546

7.  GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research--an update.

Authors:  Rod Peakall; Peter E Smouse
Journal:  Bioinformatics       Date:  2012-07-20       Impact factor: 6.937

8.  Panel of polymorphic heterologous microsatellite loci to genotype critically endangered Bengal tiger: a pilot study.

Authors:  Sudhanshu Mishra; Sujeet Kumar Singh; Ashok Kumar Munjal; Jouni Aspi; Surendra Prakash Goyal
Journal:  Springerplus       Date:  2014-01-03

9.  A panel of microsatellites to individually identify leopards and its application to leopard monitoring in human dominated landscapes.

Authors:  Samrat Mondol; R Navya; Vidya Athreya; Kartik Sunagar; Velu Mani Selvaraj; Uma Ramakrishnan
Journal:  BMC Genet       Date:  2009-12-04       Impact factor: 2.797

10.  Development and characterization of microsatellite markers in the African forest elephant (Loxodonta cyclotis).

Authors:  Natalie A Gugala; Yasuko Ishida; Nicholas J Georgiadis; Alfred L Roca
Journal:  BMC Res Notes       Date:  2016-07-26
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