| Literature DB >> 32615943 |
Siying He1, Wenjie Du2, Menglan Li1, Ming Yan3, Fang Zheng4.
Abstract
ABSRACT:Entities:
Keywords: Cancer; Meta-analysis; Podocalyxin-like protein; Prognosis; TCGA
Year: 2020 PMID: 32615943 PMCID: PMC7331259 DOI: 10.1186/s12885-020-07108-5
Source DB: PubMed Journal: BMC Cancer ISSN: 1471-2407 Impact factor: 4.430
Fig. 1Flow diagram of study selection
Characteristics of eligible studies in this meta-analysis
| Author | Year | Country | No. of Patient | Tumor type | Method | Cut-off | Outcome | Analysis | Antibody | NOS |
|---|---|---|---|---|---|---|---|---|---|---|
| Somasiri | 2004 | Canada | 272 | Breast cancer | IHC | IHC ≥ 50% | CSS | K-M Curve | M | 7 |
| Hsu | 2010 | Taiwan | 303 | Renal cell carcinoma | IHC | IHC score ≥ 1 | OS, CSS, MFS | Multivariate | P | 8 |
| Larsson | 2011 | Sweden | 626 | Colorectal cancer | IHC | IHC score ≥ 3 | OS, CSS | Multivariate | P | 8 |
| Cipollone | 2012 | Canada | 479 | Ovarian cancer | IHC | IHC score ≥ 1 | DFS | K-M Curve | M | 8 |
| Larsson | 2012 | Sweden | 607 | Colorectal cancer | IHC | IHC score ≥ 3 | OS, DFS, TTR | Multivariate | P | 9 |
| Binder | 2013 | America | 181 | Glioblastoma multiforme | IHC | NA | OS | Multivariate | NA | 7 |
| Boman | 2013 | Sweden | 100 | Urothelial bladder cancer | IHC | IHC score ≥ 3 | OS | Multivariate | M/P | 7 |
| Boman | 2013 | Sweden | 343 | Urothelial bladder cancer | IHC | IHC score ≥ 3 | OS, CSS, PFS | Multivariate | M/P | 8 |
| Forse | 2013 | Canada | 698 | Breast cancer | IHC | IHC score ≥ 3 | DFS | Multivariate | P | 9 |
| Kaprio | 2014 | Finland | 840 | Colorectal cancer | IHC | IHC score ≥ 3 | CSS | K-M Curve | M/P | 9 |
| Heby | 2015 | Sweden | 175 | Pancreatic and periampullary adenocarcinoma | IHC | IHC score ≥ 2 | OS, DFS | Multivariate | P | 7 |
| Laitinen | 2015 | Finland | 337 | Gastric cancer | IHC | IHC score ≥ 1 | CSS | Multivariate | M/P | 8 |
| Saukkonen | 2015 | Finland | 189 | Pancreatic ductal adenocarcinoma | IHC | IHC score ≥ 3 | CSS | Multivariate | M/P | 7 |
| Borg | 2016 | Sweden | 106 | Esophageal cancer | IHC | IHC score ≥ 1 | OS, TTR | K-M Curve | P | 7 |
| Borg | 2016 | Sweden | 65 | Gastric cancer | IHC | IHC score ≥ 1 | OS, TTR | K-M Curve | p | 7 |
| Chijiiwa | 2016 | Japan | 70 | Pancreatic cancer | IHC | IHC score ≥ 4 | OS, DFS | K-M Curve | M | 7 |
| Taniuchi | 2016 | Japan | 102 | Pancreatic cancer | IHC | IHC score ≥ 3 | OS | Multivariate | P | 7 |
| Kusumoto | 2017 | Japan | 114 | Lung adenocarcinoma | IHC | IHC score ≥ 1 | OS, DFS, CSS | K-M Curve | NA | 8 |
| Yuan | 2018 | China | 87 | Colorectal cancer | IHC | IHC score ≥ 3 | OS | Multivariate | M | 7 |
| Zhang | 2018 | China | 54 | Gastric cancer | IHC | IHC score ≥ 1 | OS, DFS | Multivariate | NA | 7 |
IHC Immunohistochemistry, NA Not Available, OS Overall Survival, DFS Disease-free Survival, CSS Cancer-specific Survival, NOS Newcastle-Ottawa Scale
Fig. 2Forest plot of studies evaluating HRs of PODXL expression and the prognosis of cancer patients. a High expressed PODXL and the OS; b high expressed PODXL and the DFS; c high expressed PODXL and the CSS; d membrane expressed PODXL and the OS
Subgroup analysis of pooled HR for OS
| Categories | No. of studies | No. of patients | Pooled HR (95%CI) | Heterogeneity | ||
|---|---|---|---|---|---|---|
| Fix/Random | ||||||
| OS | 13 | 2272 | 2.33 (1.76, 3.09) | 0 | 63.4 | 0.001 |
| Cancer type | 8 | |||||
| Colorectal cancer | 3 | 834 | 1.79 (1.35, 2.37) | 0 | 0 | 0.499 |
| Pancreatic cancer | 2 | 172 | 2.98 (1.95, 4.55) | 0 | 0 | 0.391 |
| Gastric cancer | 2 | 119 | 2.76 (0.48, 15.84) | 0.256 | 59.9 | 0.114 |
| Urothelial bladder cancer | 2 | 443 | 2.14 (1.48, 3.10) | 0 | 0 | 0.880 |
| Other cancers | 4 | 704 | 2.60 (1.45, 4.66) | 0.001 | 83.3 | 0 |
| Analysis | ||||||
| K-M curve | 4 | 355 | 1.85 (1.17, 2.95) | 0.009 | 0 | 0.89 |
| Multivariate | 9 | 2017 | 2.59 (1.77, 3.80) | 0 | 74.7 | 0 |
| Antibody type | ||||||
| Monoclonal antibody | 2 | 157 | 2.25 (1.36, 3.73) | 0.002 | 0 | 0.975 |
| Polyclonal antibody | 6 | 1672 | 2.55 (1.45, 4.50) | 0.001 | 0 | 81.6 |
| M + P | 2 | 443 | 2.14 (1.48, 3.10) | 0 | 0 | 0.880 |
| Ethnicity | ||||||
| European | 6 | 1361 | 1.84 (1.47, 2.30) | 0 | 0 | 0.834 |
| Asian | 6 | 730 | 3.49 (2.02, 6.02) | 0 | 64.5 | 0.015 |
| North American | 1 | 181 | 1.67 (1.23, 2.29) | – | – | |
| Sample size | ||||||
| < 150 | 8 | 628 | 2.46 (1.81, 3.33) | 0 | 0 | 0.536 |
| ≥150 | 5 | 1644 | 2.36 (1.53, 3.65) | 0 | 81.3 | 0 |
OS overall survival, HR hazard ratio
Clinicopathological features of the enrolled studies with high expressed PODXL in patients with cancer
| Clinicopathological parameters | Studies | No. of patients | Risk of high PODXL | Significant | Heterogeneity | Model | ||
|---|---|---|---|---|---|---|---|---|
| Age (< 65 vs ≥ 65) | 10 | 2905 | 0.88 (0.71, 1.10) | 1.11 | 0.269 | 42.6 | 0.084 | Fixed effects |
| Gender (male vs female) | 11 | 3081 | 1.04 (0.82, 1.32) | 0.32 | 0.749 | 0 | 0.835 | Fixed effects |
| Tumor size (< 5 cm vs ≥5 cm) | 5 | 1334 | 0.90 (0.61, 1.34) | 0.50 | 0.614 | 0 | 0.703 | Fixed effects |
| TNM stage (III-IV vs I-II) | 12 | 2417 | 1.63 (1.19, 2.23) | 3.04 | 0.002 | 13.1 | 0.319 | Fixed effects |
| Tumor grade (3–4 vs 1–2) | 6 | 2268 | 4.29 (1.84, 9.99) | 3.38 | 0.001 | 78.6 | 0 | Random effects |
Tumor differentiation (moderate/well vs poor) | 6 | 1429 | 2.84 (1.82, 4.42) | 4.62 | 0 | 0 | 0.559 | Fixed effects |
Distant metastasis (positive vs Negative) | 3 | 475 | 5.46 (2.55, 11.66) | 4.38 | 0 | 44.5 | 0.165 | Fixed effects |
Lymph node metastasis (positive vs negative) | 6 | 1574 | 1.51 (1.03, 2.22) | 2.11 | 0.034 | 0 | 0.614 | Fixed effects |
Neural invasion (positive vs negative) | 3 | 264 | 2.43 (1.02, 5.79) | 2.00 | 0.045 | 0 | 1.000 | Fixed effects |
Vascular invasion (positive or negative) | 6 | 1240 | 2.27 (1.56, 3.30) | 4.29 | 0 | 2.1 | 0.403 | Fixed effects |
Fig. 3Sensitivity analysis of this meta-analysis. a OS of PODXL expression levels; b DFS of PODXL expression levels; c CSS of PODXL expression levels; d OS of PODXL expression locations
Fig. 4Begg’s funnel plots for the studies involved in the meta-analysis. a OS of PODXL expression levels; b DFS of PODXL expression levels; c CSS of PODXL expression levels; d OS of PODXL expression locations
The difference of PODXL expression in cancers and corresponding normal tissues in TCGA datasets
| Types of cancer | TCGA dataset | No. of cancer tissues | No. of normal tissues | Log2(FC) | |
|---|---|---|---|---|---|
| Adenoid cystic carcinoma | ACC | 77 | 128 | − 1.068 | 1.10e-10 |
| Breast invasion carcinoma | BRCA | 1085 | 291 | −0.514 | 4.01e-16 |
| Cervical squamous cell carcinoma | CESC | 306 | 13 | −0.590 | 0.191 |
| Esophagus cancer | ESCA | 182 | 286 | 1.391 | 5.97e-22 |
| Glioblastoma multiforme | GBM | 163 | 207 | 0.866 | 1.12e-10 |
| Head and neck squamous cell carcinoma | HNSCC | 519 | 44 | 0.656 | 0.123 |
| Kidney chromophobe | KICH | 66 | 53 | −2.863 | 1.53e-10 |
| Kidney renal clear cell carcinoma | KIRC | 523 | 100 | −0.732 | 1.85e-9 |
| Kidney renal papillary cell carcinoma | KIRP | 286 | 60 | −4.247 | 1.31e-43 |
| Acute myeloid leukemia | LAML | 173 | 70 | 1.210 | 3.26e-2 |
| Liver hepatocellular carcinoma | LIHC | 369 | 160 | 1.508 | 8.20e-32 |
| Lung adenocarcinoma | LUAD | 483 | 347 | −2.064 | 6.27e-122 |
| Lung squamous cell carcinoma | LUSC | 486 | 338 | −2.832 | 3.86e-153 |
| Ovarian serous cystadenocarcinoma | OVSC | 426 | 88 | 1.449 | 3.96e-14 |
| Pancreatic adenocarcinoma | PAAD | 179 | 171 | 0.492 | 4.05e-5 |
| Prostate carcinoma | PRAD | 492 | 152 | −0.479 | 0.044 |
| Rectum adenocarcinoma | READ | 92 | 318 | 0.598 | 8.17e-8 |
| Skin cutaneous melanoma | SKCM | 461 | 558 | −0.636 | 3.83e-6 |
| Stomach adenocarcinoma | STAD | 408 | 211 | 1.597 | 1.64e-49 |
| Testicular germ cell tumor | TGCT | 137 | 165 | 2.750 | 3.93e-30 |
| Thyroid carcinoma | THCA | 512 | 337 | −0.796 | 6.95e-22 |
| Uterine corpus endometrial carcinoma | UCEC | 174 | 91 | −0.797 | 2.97e-5 |
| Uterine carcinosarcoma | UCS | 58 | 78 | −2.075 | 3.79e-12 |
The difference of overall survival in cancer patients with high PODXL expression vs low/median expression
| Cancer type | No. of cancer tissues | |||
|---|---|---|---|---|
| High | Low/Median | Total | ||
| ACC | 20 | 59 | 79 | 0.37 |
| BLCA | 102 | 304 | 406 | 0.34 |
| BRCA | 272 | 809 | 1081 | 0.4 |
| CESC | 73 | 218 | 291 | 0.77 |
| CHOL | 9 | 27 | 36 | 0.57 |
| COAD | 69 | 210 | 279 | 0.32 |
| ESCA | 46 | 138 | 184 | 0.16 |
| GBM | 39 | 113 | 152 | 0.041 |
| HNSCC | 130 | 389 | 519 | 0.3 |
| KICH | 15 | 49 | 64 | 0.35 |
| KIRC | 134 | 397 | 531 | < 0.0001 |
| KIRP | 72 | 215 | 287 | 0.0037 |
| LAML | 43 | 120 | 163 | 0.64 |
| LIHC | 93 | 272 | 365 | 0.82 |
| LUAD | 125 | 377 | 502 | 0.37 |
| LUSC | 126 | 368 | 494 | 0.33 |
| DLBC | 12 | 35 | 47 | 0.21 |
| MESO | 22 | 63 | 85 | 0.23 |
| OVSC | 76 | 227 | 303 | 0.95 |
| PAAD | 45 | 132 | 177 | 0.013 |
| PCPG | 45 | 134 | 179 | 0.13 |
| PRAD | 125 | 372 | 497 | 0.92 |
| READ | 42 | 123 | 165 | 0.44 |
| SARC | 65 | 194 | 259 | 0.12 |
| SKCM | 115 | 344 | 459 | 0.22 |
| TGCT | 34 | 100 | 134 | 0.29 |
| THYM | 30 | 89 | 119 | 0.78 |
| THCA | 127 | 377 | 504 | 0.87 |
| UCS | 15 | 41 | 56 | 0.58 |
| UCEC | 136 | 407 | 543 | 0.006 |
| UVM | 20 | 60 | 80 | 0.36 |
ACC adrenocortical carcinoma, BLCA bladder urothelial carcinoma, BRCA breast invasion carcinoma, CESE cervical squamous cell carcinoma, CHOL cholangiocarcinoma, COAD colon adenocarcinoma, ESCA esophageal carcinoma, GBM glioblastoma multiforme, HNSCC head and neck squamous cell carcinoma, KICH kidney chromophobe, KIRC kidney renal clear cell carcinoma, KIRP kidney renal papillary cell carcinoma, LAML acute myeloid leukemia, LIHC liver hepatocellular carcinoma, LUAD lung adenocarcinoma, LUSC lung squamous cell carcinoma, DLBC lymphoid neoplasm diffuse large B-cell lymphoma, MESO mesothelioma, OVSC ovarian serous cystadenocarcinoma, PAAD pancreatic adenocarcinoma, PCPG pheochromocytoma and paraganglioma, PRAD prostate adenocarcinoma, READ rectum adenocarcinoma, SARC sarcoma, SKCM skin cutaneous melanoma, STAD stomach adenocarcinoma, TGCT testicular germ cell tumors, THYM thymoma, THCA thyroid carcinoma, UCS uterine carcinosarcoma, UCEC uterine corpus endometrial carcinoma, UVM uveal melanoma
Fig. 5Kaplan-Meier survival curves for cancer patients based on TCGA datasets. a glioblastoma multiforme; b kidney renal papillary cell carcinoma; c pancreatic adenocarcinoma; d kidney renal clear cell carcinoma; e uterine corpus endometrial carcinoma
Fig. 6Mechanism prediction of PODXL-related genes with bioinformatics. a The protein-protein interaction network of PODXL-related genes. The lines represented the interaction between the nodes. b The functional enrichment analysis of PODXL-related genes