Literature DB >> 32613047

A dataset on above- and below-ground traits of 21 species found in banana cropping systems, cultivated individually.

Gaëlle Damour1,2, Florence Tardy3,2, Marc Dorel3,2, Delphine Moreau4.   

Abstract

The data presented in this article describe 21 species that can be found in banana cropping systems: 17 cover crops species, 2 spontaneous species and 2 cultivars of banana. The cover crop species belongs mainly to Fabaceae family, but also to Poaceae, Euphorbiacea and Asteraceae. Four repetition of each species were cultivated individually, in the field, under non-limiting conditions. 40 variables were measured on whole plant, leaves and roots, at flowering or after six months of growth for longer cycle species. This dataset is made available to provide data on these species, enable comparisons between datasets and meta-analysis on cover crop or on species presented in arable fields. The data presented in this article were used in the research articles entitled "Trait-based characterisation of cover plants' light competition strategies for weed control in banana cropping systems in the French West Indies" (Tardy et al. 2015) and "Trait-based characterization of soil exploitation strategies of banana, weeds and cover plant species" (Tardy et al. 2017).
© 2020 The Author(s).

Entities:  

Keywords:  Banana; Cover crops; Leaf traits; Light acquisition; Nutrient acquisition; Plant traits; Root traits; Weeds

Year:  2020        PMID: 32613047      PMCID: PMC7322121          DOI: 10.1016/j.dib.2020.105890

Source DB:  PubMed          Journal:  Data Brief        ISSN: 2352-3409


Specifications Table

Value of the Data

The data represent leaf, root and plant trait values of 21 species that can be found in banana cropping systems: 17 cover crops species, 2 spontaneous species and 2 cultivars of banana. They could be used by other researchers who need data on these species/varieties. The data enable other researchers to compare their own data with this dataset and to extent their analysis. These data could be used in meta-analysis on cover crops or on species present in arable fields.

Data description

The dataset presented in this article (doi:10.18167/DVN1/HIEXNF) is composed of 40 variables measured on 17 species of cover crops, 2 spontaneous species widely present in banana agrosystems in the French West Indies and 2 cultivars of banana, at flowering or after six months of growth for longer cycle species. The banana cultivars were: cultivar ‘902′ (MusaAAA, Cavendish subgroup, Bcav), which is currently used for produce bananas for export all over the world, and the hybrid cultivar‘Cirad925’ (Musa AAA, a new synthetic hybrid from CIRAD, B925), which shows improved resistance to the fungus Mycosphaerella fijiensis. The list of the species and varieties studied is provided in Table 1, along with their taxonomic groups, families and type (cover crop, spontaneous, banana). The cover crop species belongs mainly to Fabaceae family (12 species), but Poaceae (3 species), Euphorbiacea (1 species) and Asteraceae (1 species) were also studied. The spontaneous species belongs to Asteracea and Cucurbitacea families. The list of the variables is provided in Table 2 and 3. Some of them refer to whole plant (7 variables), leaves (21 variables), and roots (12 variables). Only one variable is a categorical variable, the other ones were quantitatively measured. Some variables are raw variables, while others were calculated. Calculation formulas are provided in Table 2. The length of the growth period before flowering (and the observation) is also provided.
Table 1

List of the species/cultivars included in the dataset.

AbbreviationFull namesTaxonomic groupFamilyType
APArachis pintoidicotFabaceaecover crop
B925Musa SPP., AAA group, VAR. Cirad 925monocotMusaceaebanana
BcavMusa SPP., AAA group, VAR. CavendishmonocotMusaceaebanana
BDBrachiaria decumbensmonocotPoaceaecover crop
BPBidens pilosadicotAsteraceaespontaneous
BRBrachiaria ruziziensismonocotPoaceaecover crop
CCGCajanus cajan VAR. GuadeloupedicotFabaceaecover crop
CPCentrosema pascuorumdicotFabaceaecover crop
CSCrotalaria spectabilisdicotFabaceaecover crop
CZCrotalaria zanzibaricadicotFabaceaecover crop
DLDolichos lablabdicotFabaceaecover crop
GSGliricidia sepiumdicotFabaceaecover crop
MDMucana deeringianadicotFabaceaecover crop
NVigna unguiculata VAR. DaviddicotFabaceaecover crop
NWNeonotonia wightiidicotFabaceaecover crop
MMomordica charantiadicotCucurbitaceaspontaneous
PNPaspalum notatummonocotPoaceaecover crop
PPPueraria phaseolidesdicotFabaceaecover crop
RCRicinus communisdicotEuphorbiaceaecover crop
SGStylosanthes guianensisdicotFabaceaecover crop
TPTagetes patuladicotAsteraceaecover crop
Table 2

List of the aboveground variables provided in the dataset.

AbbreviationsVariable namesUnitsOrgansCalculation
HStanding vegetative heightcmplant
W1Maximal crown widthcmplant
W2Crown width perpendicular to W1cmplant
ACrown projected areaplantpi * W1* W2
DWsStem dry weightgplant
DWb,weLeaf blade dry weight of well-exposed leavesgleaf
DWp,wePetiole dry weight of well-exposed leavesgleaf
DWleaf,weLeaf dry weight of well-exposed leavesgleafDWb,we + DWp,we
DWbLeaf blade dry weightgleaf
DWpPetiole dry weightgleaf
DWleafLeaf dry weightgleafDWb + DWp
BMaAboveground dry biomassgplantDWs + DWleaf
PBRPetiole to leaf blade weight ratiog/gplantDWp/DWb
LMFabAboveground leaf mass fraction without petiolesg/gleafDWb/BMa
LMFaAboveground leaf mass fraction with petiolesg/gleafDWleaf/Bma
LDMCLeaf dry matter contentmg/gleaf
LDMCpsLeaf dry matter content at plant scalemg/gleaf
SLAbSpecific leaf area without petiolesm²/kgleaf
SLASpecific leaf area with petiolesm²/kgleaf
SLAb,psSpecific leaf area without petioles at the plant scalem²/kgleaf
SLApsSpecific leaf area with petioles at the plant scalem²/kgleaf
LARab,psAboveground leaf area ratio without petioles at the plant scalem²/kgleafLMFab * SLAb,ps
LARapsAboveground leaf area ratio with petioles at the plant scalem²/kgleafLMFa * SLAb,ps
LARabAboveground leaf area ratio without petiolesm²/kgleafLMFab * SLAb
LARaAboveground leaf area ratio with petiolesm²/kgleafLMFa * SLAb
LATotal leaf blade arealeafDWb * SLAp,ps
LSALeaf to soil ratiom²/m²leafLA/A
LNCLeaf dry matter content%leaf
Table 3

List of the underground variables provided in the dataset.

AbbreviationsVariable namesUnitsOrgans
RDmaxMaximal rooting depthcmroot
RDmedMedian rooting depthcmroot
RWmaxMaximal rooting widthcmroot
NodNodule activitycategoricalroot
DiamMean root diametermmroot
SRLSpecific root lengthm/groot
RLDRoot length densitycm/cm3root
RWDRoot weight densityg/cm3root
RID0–20Root impact density in the 0–20 soil layer explored by the roots/dm²root
RID20–40Root impact density in the 20–40 soil layer explored by the roots/dm²root
RID40–60Root impact density in the 40–60 soil layer explored by the roots/dm²root
RID60–80Root impact density in the 60–80 soil layer explored by the roots/dm²root
List of the species/cultivars included in the dataset. List of the aboveground variables provided in the dataset. List of the underground variables provided in the dataset.

Experimental design, materials, and methods

The experiment was conducted at the CIRAD experimental station of Neufchâteau in Guadeloupe (French West Indies), for a period of six months (24 April – 6 November 2013), in a 0.4 ha field previously used as fallow [1]. Soil was andosol (FAO World reference base for soil resources) and plants were rainfed. Cumulated precipitation, mean temperature and mean total solar radiation provide favourable conditions for plant growth all year round (respectively 2829 mm, 25.6 °C and 462 +/− 40 MJ m2 month−1 over the period of the experiment). Fertilisation and weed management around the plants [1; 2] were conducted in order to ensure non-limiting conditions of plant growth and to assess their growth potential in the field. Four plants of the twenty one species/cultivars (see ‘Data description’ and Table 1) were sown manually in separate 16 m2 plots distributed randomly within 6 blocks in the field. These four plants corresponded to four repetitions per species/cultivar. On each plants, we measured variables and traits that we assumed related to resource acquisition [see 1; 2]. Traits were measured on each plants i) for short cycle species, when half the twigs had flowered, ii) for long cycles or perennial plants, at the end of the experiment (i.e. after ∼6.5 months of growth). The length of this growth period was reported as the number of days after sowing (DAS). Traits measurements methods are provided in the related research articles [1; 2], however, we provide deeper information below.

Aboveground measurements

All measured variables are presented in Table 2. The standing vegetative height and crown widths were measured at one sampling date per species, with a tape measure. Standing vegetative height (H) was measured from the bottom of the plant at the soil interface to the top of the higher vegetative organ, without stretching the plant. We considered that the crown projection on the soil could be modelled by an ellipse. Two crown widths were then measured: W1, the maximal crown width and W2, the crown width perpendicular to W1. The crown projected area (A) was then calculated (Table 2). At the top of each plant, three well-exposed leaves were harvested precociously, according to standardized protocols for the measurement of SLA [3]. Just after harvest, the leaves were placed in a plastic bag containing wet paper and stored in a cooler for less than 15 min. Then, the petioles1 and leaf blades were weighed and scanned at 200 dots per inch (scanner Epson expression 10,000XL Pro) separately. They were then oven dried at 70 °C for 48 h and weighted again. Petioles and leaf blades area were measured with WinRHIZO Pro 2009a software (Regent Instruments, Quebec, Canada). The dry weight of the leaf blades and petioles of the well-exposed leaves (DW resp. DW) were registered. The dry weight of the well-exposed leaves (DW) was calculated (Table 2). The leaf dry matter content (LDMC) was calculated by dividing the fresh biomass of the whole well-exposed leaves (petiole + leaf blade) by their dry biomass. The specific leaf area was calculated in two different ways. The specific leaf area with petiole (SLA) was calculated by dividing the whole leaf area (petiole + leaf blade) by its dry biomass. The specific leaf area without petiole (SLA) was calculated by dividing the leaf blade area by its dry biomass.2 Finally, the leaf nitrogen content (LNC) was determined by pooling the sampled well-exposed leaves of the four repetitions per species. LNC was determined as the total nitrogen content on a mass basis, measured according to Dumas method (CHN analyser, Elementar Vario Macro Cube). A sample of leaves (petioles and leaf blades separately) was then collected on the whole plant to calculated specific leaf areas at the plant scale. To do so, petiole and leaf blade samples were weighed, scanned at 200 dots per inch and oven-dried for 48 h at 70 °C. The specific leaf area with petiole at the plant scale (SLA) was calculated by dividing the whole leaf area of the sample (petiole + leaf blade) by its dry biomass. The specific leaf area without petiole at the plant scale (SLA) was calculated by dividing the leaf blade area of the sample by its dry biomass. The rest of the plant was finally harvested and separated into stems, petioles and leaf blades. Each component was weighed separately, oven-dried for 48 h at 70 °C and then weighted again. The leaf dry matter content at the plant scale (LDMC) was calculated by dividing the total fresh biomass of the whole leaves (petiole + leaf blade, including the leaves used for SLAs determinations) by its dry biomass. The dry weight of the stems (DW), of the leaf blades (DW) and of the petioles (DW) (DWs and DWp including the leaves used for SLAs determinations) were registered. The total leaf blade area (LA), the leaf to soil ration (LSA), the leaf blade to petiole ratio (PBR), the total leaf dry weight (DW) and the aboveground dry biomass (BMa) were then calculated as described in Table 2. The aboveground leaf mass fraction with and without petioles (LMFa resp. LMFa) were calculated by dividing the leaf dry weight (DWleaf resp. DWb) by BMa. The aboveground leaf area ratio was calculated with and without petioles, on well-exposed leaves and at the plant scale (LARa, LARa) by multiplying the corresponding LMF and SLA (see Table 2 for the exact calculation formulas).

Belowground measurements

All measured variables are presented in Table 3. Belowground traits were assessed, for each plant, in a 1-m deep and 1-m wide trench that was dug 20 cm from the base of the plant. The root intersections in the vertical soil profile were counted on a 5 cm × 5 cm mesh grid. The root impact density in soil layers explored by the roots were calculated as the number of root impacts observed divided by the surface of soil profile explored in this layer. For example, the root impact density in the 0–20 soil layer explored by the roots (RID) was calculated as the number of root intersections observed in this layer divided by the product of the height of the layer (20 cm) and the distance between the further root observed in this layer and the plant base. The root impact density in the 20–40, 40–60 and 60–80 soil layers explored by the roots (RID and RID) were calculated similarly. The maximal rooting depth (RD) was determined by the deepest root intersection that was observed. The maximal rooting width (RW) was determined by the furthest root intersection that was observed from the plant base, whatever its depth. The median rooting depth (RD) was calculated as the depth at which 50% of the root intersections were observed. For each plant, three cubes of 1000 cm3 of soil samples were removed: i) under the base of the plant at a depth of 0 to 10 cm, ii) under the base of the plant at a depth corresponding to half the maximum rooting depth, iii) at half the maximum rooting width and depth. Each sample was carefully washed to collect fine and coarse roots. The presence and activity of nodules (Nod) was assessed with a four-category variable (0: absence of nodules, 1: small white nodules, 2: medium size pink nodules, 3: large pink nodules). The roots were scanned at 400 dots per inch (scanner Epson expression 10000XL Pro-scanner). The length and diameter of each root sample were measured with WinRHIZO Pro 2009a software (Regent Instruments, Quebec, Canada). The mean root diameter (Diam) was calculated by averaging the diameters of the three samples per plant. The roots contained in the three soil samples were then pooled and weighed after drying for 72 h at 70 °C. The specific root length (SRL) was calculated by dividing the total length of the roots in the three samples by their root dry biomass. The root length density (RLD) and the root weight density (RWD) were calculated by dividing, respectively, the total length and the total dry biomass of the roots in the three samples by the cumulated volume of these three samples (i.e. 3000 cm3).

Declaration of Competing Interest

The authors declare that they have no known competing financial interests or personal relationships which have, or could be perceived to have, influenced the work reported in this article.
SubjectAgricultural and Biological Sciences (General)
Specific subject area:Description of aboveground and underground traits related to competition for resources of 17 cover crops, 2 spontaneous species and 2 cultivars of banana.
Type of data:Table
How data were acquired:Field measures of plants grown individually in the field.Instruments and methods:Scanner and WinRhizo Pro-analytical software (Regent Instruments) for leaf and root measurements10 cm × 10 cm mesh grid positionned on vertical soil profiles for root impacts observationsCHN analyser (Elementar Vario Macro Cube) and Dumas method for leaf total N quantification
Data format:Raw
analysed
Parameters for data collection:Type of soil: andosols
Irrigation: rain-fed regime, cumulated annual precipitation 2829 mm Fertilisation: 50 g of urea (46% N) applied at the base of each plant at the beginning of the experiment.
Temperature: 25.6 °C averaged over the experiment, ranging from 22.8 °C to 29.7 °C.
Plants were grown individually, in the field, in separated 16 m² plots.
Description of data collection:The data were collected on each plants (4 per species/cultivars) at flowering for short cycle species, and after ∼6.5 months of growth for longer cycles or perennial plants. Well-exposed leaves were separated to determine some traits according to standardized protocols in ecology (SLA, LDMC, LNC). The rest of the plants were separated into stems, petioles and leaf blades and weighted. A 1-m deep and 1-m wide trench that was dug 20 cm from the base of each plant. The root intersections in the vertical soil profile were counted on a 5 cm × 5 cm mesh grid. For each plant, three cubes of 1000 cm3 of soil samples were removed at different positions in the root system.
Data source location:City/Town/Region: Experimental station of Neufchateau, Capesterre Belle EauCountry: Guadeloupe, French West IndiesLatitude and longitude (and GPS coordinates) for collected samples/data: 16°05′N, 61°35′W
Data accessibility:Repository name: Cirad DataverseData identification number: /Direct URL to data: doi:10.18167/DVN1/HIEXNF
Related research article:Tardy F., Damour G., Dorel M., Moreau D. 2017. Trait-based characterization of soil exploitation strategies of banana, weeds and cover plant species. PlosOne, 12(3): e0173066. http://dx.doi.org/10.1371/journal.pone.0173066Tardy F., Moreau D., Dorel M., Damour G. 2015. Trait-based characterisation of cover plants' light competition strategies for weed control in banana cropping systems in the French West Indies. European Journal of Agronomy, 71: 10–18. http://dx.doi.org/10.1016/j.eja.2015.08.002
  1 in total

1.  Trait-based characterisation of soil exploitation strategies of banana, weeds and cover plant species.

Authors:  Florence Tardy; Gaëlle Damour; Marc Dorel; Delphine Moreau
Journal:  PLoS One       Date:  2017-03-03       Impact factor: 3.240

  1 in total

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