Literature DB >> 32607504

Predictions, role of interventions and effects of a historic national lockdown in India's response to the COVID-19 pandemic: data science call to arms.

Debashree Ray1,2, Maxwell Salvatore3,4, Rupam Bhattacharyya3, Lili Wang3, Jiacong Du3,4, Shariq Mohammed3,5, Soumik Purkayastha3, Aritra Halder6, Alexander Rix3,4, Daniel Barker3, Michael Kleinsasser3, Yiwang Zhou3, Debraj Bose3, Peter Song3, Mousumi Banerjee3,7, Veerabhadran Baladandayuthapani3, Parikshit Ghosh8, Bhramar Mukherjee3,4.   

Abstract

With only 536 cases and 11 fatalities, India took the historic decision of a 21-day national lockdown on March 25. The lockdown was first extended to May 3 soon after the analysis of this paper was completed, and then to May 18 while this paper was being revised. In this paper, we use a Bayesian extension of the Susceptible-Infected-Removed (eSIR) model designed for intervention forecasting to study the short- and long-term impact of an initial 21-day lockdown on the total number of COVID-19 infections in India compared to other less severe non-pharmaceutical interventions. We compare effects of hypothetical durations of lockdown on reducing the number of active and new infections. We find that the lockdown, if implemented correctly, can reduce the total number of cases in the short term, and buy India invaluable time to prepare its healthcare and disease-monitoring system. Our analysis shows we need to have some measures of suppression in place after the lockdown for increased benefit (as measured by reduction in the number of cases). A longer lockdown between 42-56 days is preferable to substantially "flatten the curve" when compared to 21-28 days of lockdown. Our models focus solely on projecting the number of COVID-19 infections and, thus, inform policymakers about one aspect of this multi-faceted decision-making problem. We conclude with a discussion on the pivotal role of increased testing, reliable and transparent data, proper uncertainty quantification, accurate interpretation of forecasting models, reproducible data science methods and tools that can enable data-driven policymaking during a pandemic. Our software products are available at covind19.org.

Entities:  

Keywords:  Basic reproduction number; Coronavirus; Credible interval; India; Intervention forecasting; SIR model

Year:  2020        PMID: 32607504      PMCID: PMC7326342          DOI: 10.1162/99608f92.60e08ed5

Source DB:  PubMed          Journal:  Harv Data Sci Rev        ISSN: 2644-2353


  8 in total

1.  Association of Public Health Interventions With the Epidemiology of the COVID-19 Outbreak in Wuhan, China.

Authors:  An Pan; Li Liu; Chaolong Wang; Huan Guo; Xingjie Hao; Qi Wang; Jiao Huang; Na He; Hongjie Yu; Xihong Lin; Sheng Wei; Tangchun Wu
Journal:  JAMA       Date:  2020-05-19       Impact factor: 56.272

2.  Prudent public health intervention strategies to control the coronavirus disease 2019 transmission in India: A mathematical model-based approach.

Authors:  Sandip Mandal; Tarun Bhatnagar; Nimalan Arinaminpathy; Anup Agarwal; Amartya Chowdhury; Manoj Murhekar; Raman R Gangakhedkar; Swarup Sarkar
Journal:  Indian J Med Res       Date:  2020 Feb & Mar       Impact factor: 2.375

3.  Early Transmission Dynamics in Wuhan, China, of Novel Coronavirus-Infected Pneumonia.

Authors:  Qun Li; Xuhua Guan; Peng Wu; Xiaoye Wang; Lei Zhou; Yeqing Tong; Ruiqi Ren; Kathy S M Leung; Eric H Y Lau; Jessica Y Wong; Xuesen Xing; Nijuan Xiang; Yang Wu; Chao Li; Qi Chen; Dan Li; Tian Liu; Jing Zhao; Man Liu; Wenxiao Tu; Chuding Chen; Lianmei Jin; Rui Yang; Qi Wang; Suhua Zhou; Rui Wang; Hui Liu; Yinbo Luo; Yuan Liu; Ge Shao; Huan Li; Zhongfa Tao; Yang Yang; Zhiqiang Deng; Boxi Liu; Zhitao Ma; Yanping Zhang; Guoqing Shi; Tommy T Y Lam; Joseph T Wu; George F Gao; Benjamin J Cowling; Bo Yang; Gabriel M Leung; Zijian Feng
Journal:  N Engl J Med       Date:  2020-01-29       Impact factor: 176.079

4.  Epidemiological and clinical characteristics of 99 cases of 2019 novel coronavirus pneumonia in Wuhan, China: a descriptive study.

Authors:  Nanshan Chen; Min Zhou; Xuan Dong; Jieming Qu; Fengyun Gong; Yang Han; Yang Qiu; Jingli Wang; Ying Liu; Yuan Wei; Jia'an Xia; Ting Yu; Xinxin Zhang; Li Zhang
Journal:  Lancet       Date:  2020-01-30       Impact factor: 79.321

Review 5.  An interim review of the epidemiological characteristics of 2019 novel coronavirus.

Authors:  Sukhyun Ryu; Byung Chul Chun
Journal:  Epidemiol Health       Date:  2020-02-06

6.  Clinical Characteristics of Coronavirus Disease 2019 in China.

Authors:  Wei-Jie Guan; Zheng-Yi Ni; Yu Hu; Wen-Hua Liang; Chun-Quan Ou; Jian-Xing He; Lei Liu; Hong Shan; Chun-Liang Lei; David S C Hui; Bin Du; Lan-Juan Li; Guang Zeng; Kwok-Yung Yuen; Ru-Chong Chen; Chun-Li Tang; Tao Wang; Ping-Yan Chen; Jie Xiang; Shi-Yue Li; Jin-Lin Wang; Zi-Jing Liang; Yi-Xiang Peng; Li Wei; Yong Liu; Ya-Hua Hu; Peng Peng; Jian-Ming Wang; Ji-Yang Liu; Zhong Chen; Gang Li; Zhi-Jian Zheng; Shao-Qin Qiu; Jie Luo; Chang-Jiang Ye; Shao-Yong Zhu; Nan-Shan Zhong
Journal:  N Engl J Med       Date:  2020-02-28       Impact factor: 91.245

7.  An interactive web-based dashboard to track COVID-19 in real time.

Authors:  Ensheng Dong; Hongru Du; Lauren Gardner
Journal:  Lancet Infect Dis       Date:  2020-02-19       Impact factor: 25.071

8.  Healthcare impact of COVID-19 epidemic in India: A stochastic mathematical model.

Authors:  Kaustuv Chatterjee; Kaushik Chatterjee; Arun Kumar; Subramanian Shankar
Journal:  Med J Armed Forces India       Date:  2020-04-02
  8 in total
  30 in total

1.  Tracking COVID-19 burden in India: A review using SMAART RAPID tracker.

Authors:  Ashish Joshi; Harpreet Kaur; L Nandini Krishna; Shruti Sharma; Gautam Sharda; Garima Lohra; Ashruti Bhatt; Ashoo Grover
Journal:  Online J Public Health Inform       Date:  2021-03-12

2.  A systematic review on AI/ML approaches against COVID-19 outbreak.

Authors:  Onur Dogan; Sanju Tiwari; M A Jabbar; Shankru Guggari
Journal:  Complex Intell Systems       Date:  2021-07-05

3.  Lessons from SARS-CoV-2 in India: A data-driven framework for pandemic resilience.

Authors:  Maxwell Salvatore; Soumik Purkayastha; Lakshmi Ganapathi; Rupam Bhattacharyya; Ritoban Kundu; Lauren Zimmermann; Debashree Ray; Aditi Hazra; Michael Kleinsasser; Sunil Solomon; Ramnath Subbaraman; Bhramar Mukherjee
Journal:  Sci Adv       Date:  2022-06-17       Impact factor: 14.957

4.  Predictive models of COVID-19 in India: A rapid review.

Authors:  Atul Kotwal; Arun Kumar Yadav; Jyoti Yadav; Jyoti Kotwal; Sudhir Khune
Journal:  Med J Armed Forces India       Date:  2020-06-17

Review 5.  Largest democracy in the world crippled by COVID-19: current perspective and experience from India.

Authors:  Rahil Changotra; Himadri Rajput; Prachi Rajput; Sneha Gautam; Amarpreet Singh Arora
Journal:  Environ Dev Sustain       Date:  2020-08-31       Impact factor: 3.219

Review 6.  Non-pharmaceutical interventions during the COVID-19 pandemic: A review.

Authors:  Nicola Perra
Journal:  Phys Rep       Date:  2021-02-13       Impact factor: 25.600

7.  Forecasting COVID-19 epidemic in India and high incidence states using SIR and logistic growth models.

Authors:  B Malavika; S Marimuthu; Melvin Joy; Ambily Nadaraj; Edwin Sam Asirvatham; L Jeyaseelan
Journal:  Clin Epidemiol Glob Health       Date:  2020-06-27

8.  Inter-state transmission potential and vulnerability of COVID-19 in India.

Authors:  Kapil Ghosh; Nairita Sengupta; Dipanwita Manna; Sunil Kumar De
Journal:  Prog Disaster Sci       Date:  2020-06-16

9.  Investigating the dynamics of COVID-19 pandemic in India under lockdown.

Authors:  Chintamani Pai; Ankush Bhaskar; Vaibhav Rawoot
Journal:  Chaos Solitons Fractals       Date:  2020-06-10       Impact factor: 5.944

10.  COVID-19 pandemic persuaded lockdown effects on environment over stone quarrying and crushing areas.

Authors:  Indrajit Mandal; Swades Pal
Journal:  Sci Total Environ       Date:  2020-05-11       Impact factor: 7.963

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