Literature DB >> 32604029

Molecular docking studies, structural and spectroscopic properties of monomeric and dimeric species of benzofuran-carboxylic acids derivatives: DFT calculations and biological activities.

Abir Sagaama1, Olfa Noureddine1, Silvia Antonia Brandán2, Anna Jarczyk- Jędryka3, Henryk T Flakus4, Houcine Ghalla1, Noureddine Issaoui5.   

Abstract

Structural optimization, molecular docking analysis, electronic and vibrational properties have been investigated for the 1-benzofuran-2-carboxylic acid (2BF) and 1-benzofuran-3-carboxylic acid (3BF) using DFT/B3LYP/6-311++G(d,p) level of theory. The theoretical parameters have a very good consistency with the experimental ones. The weak intermolecular interactions were analyzed by different tool such as: Hirshfeld surfaces, topological analysis and natural bond orbital studies. The nonlinear optical properties have been investigated. Molecular electrostatic potential and frontier molecular orbitals (FMOs) analysis have been carried out to understand the reactivity of the molecule. In addition, TD-DFT calculation is initiated to simulate the UV-vis absorption spectrum and to determine several important electronic properties like HOMO-LUMO gap energy and electronic transitions. The complete vibrational assignments and the force constants were reported for monomer and dimers of both acids. The biological activities of the tow acids have been studied via molecular docking analysis. The later calculations prove that the studied acids have an inhibitor effect against cancer and microbial diseases.
Copyright © 2020 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  AIM; DFT; HS; Hydrogen-bond; Molecular docking; RDG

Year:  2020        PMID: 32604029     DOI: 10.1016/j.compbiolchem.2020.107311

Source DB:  PubMed          Journal:  Comput Biol Chem        ISSN: 1476-9271            Impact factor:   2.877


  6 in total

1.  Theoretical and experimental study of guar gum sulfation.

Authors:  Aleksandr S Kazachenko; Feride Akman; Abir Sagaama; Noureddine Issaoui; Yuriy N Malyar; Natalya Yu Vasilieva; Valentina S Borovkova
Journal:  J Mol Model       Date:  2021-01-02       Impact factor: 1.810

2.  The antioxidative potential of procyanidin B1: DFT (density functional theory) and docking approaches.

Authors:  Phan Thi Thuy; Pham Minh Quan; Dau Xuan Duc; Ninh The Son
Journal:  J Mol Model       Date:  2022-10-12       Impact factor: 2.172

3.  DFT and molecular docking study of chloroquine derivatives as antiviral to coronavirus COVID-19.

Authors:  Olfa Noureddine; Noureddine Issaoui; Omar Al-Dossary
Journal:  J King Saud Univ Sci       Date:  2020-11-25

4.  Quantum chemical studies on molecular structure, AIM, ELF, RDG and antiviral activities of hybrid hydroxychloroquine in the treatment of COVID-19: Molecular docking and DFT calculations.

Authors:  Olfa Noureddine; Noureddine Issaoui; Mouna Medimagh; Omar Al-Dossary; Houda Marouani
Journal:  J King Saud Univ Sci       Date:  2021-01-06

5.  Facile synthesis, crystal structure, biological evaluation, and molecular modeling studies of N-((4-acetyl phenyl) carbamothioyl) pivalamide as the multitarget-directed ligand.

Authors:  Aamer Saeed; Syeda Abida Ejaz; Aqsa Khalid; Pervaiz Ali Channar; Mubashir Aziz; Tanveer A Wani; Seema Zargar; Sidra Hassan; Hammad Ismail; Dania Khalid; Muhammad Zaffar Hashmi; Tuncer Hökelek; Abdullahi Tunde Aborode
Journal:  Front Chem       Date:  2022-09-26       Impact factor: 5.545

6.  Modelling the DFT structural and reactivity study of feverfew and evaluation of its potential antiviral activity against COVID-19 using molecular docking and MD simulations.

Authors:  Shradha Lakhera; Kamal Devlal; Arabinda Ghosh; Papia Chowdhury; Meenakshi Rana
Journal:  Chem Zvesti       Date:  2022-01-15       Impact factor: 2.146

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.