Literature DB >> 32599507

How low can we go? Structure determination of small biological complexes using single-particle cryo-EM.

Mengyu Wu1, Gabriel C Lander2.   

Abstract

For decades, high-resolution structural studies of biological macromolecules with masses of <200kDa by cryo-EM single-particle analysis were considered infeasible. It was not until several years after the advent of direct detectors that the overlooked potential of cryo-EM for studying small complexes was first realized. Subsequent advances in sample preparation, imaging, and data processing algorithms have improved our ability to visualize small biological targets. In the past two years alone, nearly two hundred high-resolution structures have been determined of small (<200kDa) macromolecules, the smallest being approximately 39kDa in molecular weight. Here we summarize some salient lessons and strategies for cryo-EM studies of small biological complexes, and also consider future prospects for routine structure determination.
Copyright © 2020 Elsevier Ltd. All rights reserved.

Entities:  

Year:  2020        PMID: 32599507      PMCID: PMC7666008          DOI: 10.1016/j.sbi.2020.05.007

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  13 in total

1.  Structural analyses of an RNA stability element interacting with poly(A).

Authors:  Seyed-Fakhreddin Torabi; Yen-Lin Chen; Kaiming Zhang; Jimin Wang; Suzanne J DeGregorio; Anand T Vaidya; Zhaoming Su; Suzette A Pabit; Wah Chiu; Lois Pollack; Joan A Steitz
Journal:  Proc Natl Acad Sci U S A       Date:  2021-04-06       Impact factor: 11.205

Review 2.  Molecular interactions at the colchicine binding site in tubulin: An X-ray crystallography perspective.

Authors:  Jiaxing Wang; Duane D Miller; Wei Li
Journal:  Drug Discov Today       Date:  2021-12-08       Impact factor: 7.851

Review 3.  Conquer by cryo-EM without physically dividing.

Authors:  Gabriel C Lander; Robert M Glaeser
Journal:  Biochem Soc Trans       Date:  2021-11-01       Impact factor: 4.919

4.  Visualizing transiently associated catalytic domains in assembly-line biosynthesis using cryo-electron microscopy.

Authors:  Jacque L Faylo; David W Christianson
Journal:  J Struct Biol       Date:  2021-10-01       Impact factor: 2.867

5.  Correlating ion channel structure and function.

Authors:  Philipp A M Schmidpeter; Crina M Nimigean
Journal:  Methods Enzymol       Date:  2021-03-25       Impact factor: 1.682

6.  Multi-Scale Flexible Fitting of Proteins to Cryo-EM Density Maps at Medium Resolution.

Authors:  Marta Kulik; Takaharu Mori; Yuji Sugita
Journal:  Front Mol Biosci       Date:  2021-03-19

7.  Challenges in solving structures from radiation-damaged tomograms of protein nanocrystals assessed by simulation.

Authors:  Ariana Peck; Qing Yao; Aaron S Brewster; Petrus H Zwart; John M Heumann; Nicholas K Sauter; Grant J Jensen
Journal:  Acta Crystallogr D Struct Biol       Date:  2021-04-14       Impact factor: 7.652

8.  Multiscale modelling of the extracellular matrix.

Authors:  Hua Wong; Jean-Marc Crowet; Manuel Dauchez; Sylvie Ricard-Blum; Stéphanie Baud; Nicolas Belloy
Journal:  Matrix Biol Plus       Date:  2021-12-14

Review 9.  Structural Aspects of the Allergen-Antibody Interaction.

Authors:  Anna Pomés; Geoffrey A Mueller; Maksymilian Chruszcz
Journal:  Front Immunol       Date:  2020-09-02       Impact factor: 7.561

Review 10.  Structure determination of GPCRs: cryo-EM compared with X-ray crystallography.

Authors:  Javier García-Nafría; Christopher G Tate
Journal:  Biochem Soc Trans       Date:  2021-11-01       Impact factor: 5.407

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