Literature DB >> 32597448

Fast and accurate calculation of hydration energies of molecules and ions.

Alexander A Voityuk1, Sergei F Vyboishchikov2.   

Abstract

We present an efficient method with adjustable parameters for calculating the hydration free energy of molecules and ions using the gas-phase geometry and atomic charges. In most cases, the method yields accurate results, with a mean absolute error for neutral molecules below 1 kcal mol-1 and for ions about 3 kcal mol-1. Overall, despite its simplicity, the proposed method shows the best performance among major computational approaches applied to estimate hydration free energies. The method requires as input Cartesian cordinates and CM5 atomic charges only, which are easily available from any DFT calculation, and yields the hydration energy in a matter of seconds for a medium-size molecule or ion.

Year:  2020        PMID: 32597448     DOI: 10.1039/d0cp02667k

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  4 in total

1.  SN2 versus E2 reactions in a complex microsolvated environment: theoretical analysis of the equilibrium and activation steps of a nucleophilic fluorination.

Authors:  Fernando M Lisboa; Josefredo R Pliego
Journal:  J Mol Model       Date:  2022-05-21       Impact factor: 1.810

Review 2.  Accurate Prediction of Aqueous Free Solvation Energies Using 3D Atomic Feature-Based Graph Neural Network with Transfer Learning.

Authors:  Dongdong Zhang; Song Xia; Yingkai Zhang
Journal:  J Chem Inf Model       Date:  2022-04-14       Impact factor: 6.162

3.  How Do Defects in Carbon Nanostructures Regulate the Photoinduced Electron Transfer Processes? The Case of Phenine Nanotubes.

Authors:  Olga A Stasyuk; Anton J Stasyuk; Miquel Solà; Alexander A Voityuk
Journal:  Chemphyschem       Date:  2021-05-18       Impact factor: 3.102

4.  Initiating Electron Transfer in Doubly Curved Nanographene Upon Supramolecular Complexation of C60.

Authors:  Simon Zank; Jesús M Fernández-García; Anton J Stasyuk; Alexander A Voityuk; Marcel Krug; Miquel Solà; Dirk M Guldi; Nazario Martín
Journal:  Angew Chem Int Ed Engl       Date:  2021-12-29       Impact factor: 16.823

  4 in total

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