| Literature DB >> 32595698 |
Zixin Guo1,2, Jingyu Huang1,3, Yujin Wang1,3, Xiao-Ping Liu4, Wei Li5, Jie Yao2,6, Sheng Li2,6, Weidong Hu1,3.
Abstract
OBJECTIVE: To explore the expression of secreted phosphoprotein 1 (SPP1) in lung adenocarcinoma (LUAD), and evaluate its relationship with clinicopathological characteristics and prognosis of LUAD, and analyze the advantages of SPP1 as a potential prognostic marker in LUAD.Entities:
Keywords: bioinformatics; lung adenocarcinoma; osteopontin; prognosis; prognostic marker; secreted phosphoprotein 1
Year: 2020 PMID: 32595698 PMCID: PMC7303289 DOI: 10.3389/fgene.2020.00547
Source DB: PubMed Journal: Front Genet ISSN: 1664-8021 Impact factor: 4.599
FIGURE 1(A) The messenger RNA (mRNA) expression levels of SPP1 in non-small cell lung cancer (NSCLC) and other cancer cell lines from the Cancer Cell Line Encyclopedia (CCLE) database. NSCLC ranked ninth among cancer cell lines based on SPP1 expression. (B–H) Comparison of SPP1 mRNA levels in normal lung tissues and lung adenocarcinoma (LUAD) tissues across seven analyses of LUAD, and each study showed that the SPP1 mRNA expression levels in LUAD tissues were significantly higher than that in normal lung tissues.
FIGURE 2(A) The protein expression of secreted phosphoprotein 1 (SPP1) was detected in normal lung tissues from the Human Protein Atlas (HPA) database. (B) The protein expression of SPP1 was medium in lung adenocarcinoma (LUAD) from the HPA database. (C) The survival curves of 262 samples with high SPP1 mRNA expression and 238 samples with low SPP1 mRNA expression in HPA database.
FIGURE 3(A) The messenger RNA (mRNA) expression of secreted phosphoprotein 1 (SPP1) in lung adenocarcinoma (LUAD) and normal lung tissues based on GSE68465. (B) The overall survival rates of the SPP1 high-expression group and the SPP1 low-expression group in LUAD based on GSE68465.
Associations between SPP1 expression and clinicopathological factors of patients with LUAD (based on GSE68465).
| Gender | 443 | 6.340 | 0.012 | ||
| Male | 98 | 125 | |||
| Female | 123 | 97 | |||
| Age | 443 | 0.435 | 0.510 | ||
| <60 years | 67 | 61 | |||
| ≥60 years | 154 | 161 | |||
| T stage | 441 | 6.468 | 0.091 | ||
| T1 | 72 | 78 | |||
| T2 | 133 | 118 | |||
| T3 | 14 | 14 | |||
| T4 | 2 | 10 | |||
| N stage | 440 | 13.486 | 0.001 | ||
| N0 | 158 | 141 | |||
| N1 | 48 | 40 | |||
| N2 | 14 | 39 | |||
| Progression or relapse | 362 | 5.485 | 0.019 | ||
| Yes | 96 | 109 | |||
| No | 93 | 64 | |||
| Histological grade | 436 | 9.195 | 0.010 | ||
| Well differentiated | 40 | 20 | |||
| Moderate differentiation | 93 | 116 | |||
| Poorly differentiated | 84 | 83 | |||
| Smoking history | 349 | 2.357 | 0.125 | ||
| Yes | 170 | 130 | |||
| No | 22 | 27 | |||
FIGURE 4(A) The relationship between secreted phosphoprotein 1 (SPP1) expression and six immune infiltrates in lung adenocarcinoma (LUAD) from the Tumor Immune Estimation Resource (TIMER). (B) The survival rate of SPP1 and the LUAD immune subsets from the TIMER.
Multivariate Cox proportional hazard regression analyses of the relationship between clinicopathological characteristics and overall survival in LUAD from the Tumor Immune Estimation Resource (TIMER).
| Age | 1.017 | 1.000–1.035 | 0.046 |
| Gender (male) | 0.826 | 0.591–1.154 | 0.262 |
| Stage2 | 2.350 | 1.548–3.567 | 0.000 |
| Stage3 | 2.999 | 1.969–4.569 | 0.000 |
| Stage4 | 3.789 | 2.068–6.941 | 0.000 |
| Purity | 1.471 | 0.642–3.370 | 0.362 |
| B_cell | 0.040 | 0.003–0.612 | 0.021 |
| CD8_Tcell | 2.344 | 0.341–16.136 | 0.387 |
| CD4_Tcell | 36.137 | 2.255–579.010 | 0.011 |
| Macrophage | 0.588 | 0.035–9.888 | 0.712 |
| Neutrophil | 0.262 | 0.005–13.909 | 0.508 |
| Dendritic | 0.333 | 0.077–1.444 | 0.142 |
| SPP1 | 1.150 | 1.048–1.261 | 0.003 |
Gene set enrichment in SPP1 high-expression phenotype (based on GSE68465).
| PROTEIN_SECRETION | 0.538 | 0.211 | 0.010 |
| MTORC1_SIGNALING | 0.518 | 0.127 | 0.006 |
| ANGIOGENESIS | 0.566 | 0.138 | 0.021 |
| GLYCOLYSIS | 0.422 | 0.202 | 0.020 |
FIGURE 5Gene set enrichment analysis (GSEA) showed that the samples with high secreted phosphoprotein 1 (SPP1) expression enriched in (A) protein secretion, (B) mTORC1 signaling, (C) angiogenesis, and (D) glycolysis pathway.
FIGURE 6(A) The messenger RNA (mRNA) expression of secreted phosphoprotein 1 (SPP1) in lung adenocarcinoma (LUAD) and normal lung tissues based on The Cancer Genome Atlas (TCGA)-LUAD. (B) The overall survival rates of the SPP1 high-expression group and the SPP1 low-expression group in LUAD based on TCGA-LUAD.