| Literature DB >> 32595670 |
Carol A Rowe1, Robert W Lichvar2, Paul G Wolf1,3.
Abstract
Wetland areas are critical habitats, especially in northern regions of North America. Wetland classifications are based on several factors, including the presence of certain plant species and assemblages of species, of which trees play a significant role. Here we examined wetland species of birch (Betula) in North America, with a focus on Alaska, and the use of birche tree species in wetland delineation. We sampled over 200 trees from sites, including Alaska, Alberta, Minnesota, and New Hampshire. We used genetic data from over 3000 loci detected by restriction site associated DNA analysis. We used an indirect estimate of ploidy based on allelic ratios and we also examined population genetic structure. We find that inferred ploidy is strongly associated with genetic groupings. We find two main distinct groups; one found throughout most of Alaska, extending into Alberta. This group is probably attributable to Betula kenaica, Betula neoalaskana, or both. This group has a diploid genetic pattern although this could easily be a function of allopolyploidy. The second major genetic group appears to extend from Eastern North America into parts of southeastern Alaska. This group represents Betula papyrifera, and is not diploid based on allelic ratios. Published chromosome counts indicate pentaploidy. Because B. papyrifera is the only one of the above species that is distinctly associated with wetland habitats, our findings indicate that tree species of birch found in most parts of Alaska are not reliable indicators of wetland habitats. These results help to support stronger wetland ratings assigned to the tree species of birch for delineation purposes.Entities:
Keywords: Betula; Betula kenaica; Betula neoalaskana; Betula papyrifera; ddRADseq; population genomics
Year: 2020 PMID: 32595670 PMCID: PMC7300271 DOI: 10.3389/fpls.2020.00750
Source DB: PubMed Journal: Front Plant Sci ISSN: 1664-462X Impact factor: 5.753
Morphological characters used to distinguish the three species of Betula found in Alaska, based on descriptions by Viereck and Little (2007) and summarized by Packee (2004).
| Mature bark | Thinly layered; red/brown to gray/white with pink tinges. Lenticels black and prominent | Cream to chalky white, thick layers. Lenticels pale | Red to off-white, thick layers. Lenticels black and prominent |
| Young bark | Dark; glabrous | Reddish, coppery, or purple, dark to light; glabrous | Dark rough with resin glands |
| Spur shoots | 6–15 mm | 6–15 mm | 6–15 mm |
| Buds | Greenish or dark brown; <10 mm | Greenish or dark brown; <10 mm | Greenish or dark brown; <10 mm |
| Leaves | Triangular; 4–5 cm long, 2.5–4.5 cm wide | Ovate; 5–9 (12) cm long, 4–7 cm wide | Oval to somewhat triangular; 4–8 cm long, 2.5–5 cm wide |
| Leaf margin | Doubly serrate, often with fringe of light hairs | Doubly serrate or serrate-dentate | Coarsely doubly serrate, no hairs |
| Leaf base | Rounded to almost flat | Rounded, cuneate, or truncate | Broadly cuneate to round |
| Infructescence | 2–5 cm | 2.5–5 cm | 2–4 cm |
FIGURE 1Sample locations for this study. See Supplementary Table 1 for detailed locations. Arrow indicates higher scaled map of region around Anchorage, Alaska (Figure 2). Colors correspond to Structure results (Figure 3), which also corresponds with estimated cytogenetic grouping.
FIGURE 2Sample locations in Alaska. Colors correspond to Structure results (Figure 3).
FIGURE 3Structure analysis at k = 4, which assumes four source populations. Each column represents an individual. Note that the dark and light blue samples (left side) are from 6 and 7 km north of Anchorage, Alaska, respectively (see Figure 2). These samples clustered with remaining Alaska samples at k = 2 and k = 3. The optimal number of groups was k = 2. Note that Skagway (in south-eastern Alaska) groups with other eastern samples (except BP_25 which 81% Eastern, 19% Western), and one Alaskan sample from close to Anchorage (8553b – indicated by arrow) appears to be a hybrid.
FIGURE 4Example of gbs2ploidy output. Sample on left has 1:1 allelic ratio, typical of a diploid or allopolyploidy. Example on the right is indicative of a triploid or higher ploidy level. Example in center is ambiguous – some loci appear to be diploid, whereas others are higher ploidy.
Structure groupings and ploidy for each population of Betula.
| 8554 | AK | Western | Dip | 5 |
| 8552 | AK | Western | Dip | 5 |
| 1028 | AK | Western | Dip | 4 |
| 1029 | AK | Western | Dip | 4 |
| 1030 | AK | Western | Dip | 4 |
| 1031 | AK | Western | Dip | 5 |
| 8553 | AK | Western* | 2 Dip; 2 Amb | 4 |
| 8555 | AK | Western | 3 Dip; 1 Amb | 4 |
| 8556 | AK | Western | Dip | 4 |
| 8557 | AK | Western | Dip | 3 |
| 8558 | AK | Western | Dip | 5 |
| 8559 | AK | Western | Dip | 5 |
| 8560 | AK | Western | Dip | 5 |
| 8561 | AK | Western | Dip | 5 |
| 8562 | AK | Western | 3 Dip; 1 Amb | 4 |
| 8563 | AK | Western | Dip | 5 |
| 8564 | AK | Western | Dip | 4 |
| 8565 | AK | Western | Dip | 5 |
| 8566 | AK | Western | Dip | 3 |
| 8567 | AK | Western | Dip | 3 |
| 8568 | AK | Western | Dip | 4 |
| 8569 | AK | Western | 4 Dip; 1Amb | 5 |
| 8570 | AK | Western | Dip | 5 |
| 8571 | AK | Western | Dip | 5 |
| 8572 | AK | Western | Dip | 5 |
| 8573 | AK | Western | Dip | 4 |
| 8574 | AK | Western | Dip | 5 |
| 8575 | AK | Western | Dip | 5 |
| 8576 | AK | Western | Dip | 5 |
| 8577 | AK | Western | Dip | 5 |
| 8578 | AK | Western | Dip | 5 |
| Ken | AK | Western | Dip | 2 |
| ALB | Alb | Mixed | 4 Dip; 2 Amb; 2 Poly | 8 |
| MNSE | MN | Eastern | 2 Amb; 2 Poly | 7 |
| NB | NH | Eastern | 3 Poly; 2 Amb | 5 |
| BP | AK | Eastern | 16 Poly; 4 Amb | 20 |