Literature DB >> 32593395

Graph Fourier transform of fMRI temporal signals based on an averaged structural connectome for the classification of neuroimaging.

Abdelbasset Brahim1, Nicolas Farrugia2.   

Abstract

Graph signal processing (GSP) is a framework that enables the generalization of signal processing to multivariate signals described on graphs. In this paper, we present an approach based on Graph Fourier Transform (GFT) and machine learning for the analysis of resting-state functional magnetic resonance imaging (rs-fMRI). For each subject, we use rs-fMRI time series to compute several descriptive statistics in regions of interest (ROI). Next, these measures are considered as signals on an averaged structural graph built using tractography of the white matter of the brain, defined using the same ROI. GFT of these signals is computed using the structural graph as a support, and the obtained feature vectors are subsequently benchmarked in a supervised learning setting. Further analysis suggests that GFT using structural connectivity as a graph and the standard deviation of fMRI time series as signals leads to more accurate supervised classification using a world-wide multi-site database known as ABIDE (Autism Brain Imaging Data Exchange) when compared to several other statistical metrics. Moreover, the proposed approach outperforms several approaches, based on using functional connectomes or complex functional network measures as features for classification.
Copyright © 2020 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Classification; Graph signal processing; Machine learning; Neuroimaging; Resting-state analysis

Year:  2020        PMID: 32593395     DOI: 10.1016/j.artmed.2020.101870

Source DB:  PubMed          Journal:  Artif Intell Med        ISSN: 0933-3657            Impact factor:   5.326


  4 in total

1.  Functional brain activity constrained by structural connectivity reveals cohort-specific features for serum neurofilament light chain.

Authors:  Saurabh Sihag; Sébastien Naze; Foad Taghdiri; Melisa Gumus; Charles Tator; Robin Green; Brenda Colella; Kaj Blennow; Henrik Zetterberg; Luis Garcia Dominguez; Richard Wennberg; David J Mikulis; Maria C Tartaglia; James R Kozloski
Journal:  Commun Med (Lond)       Date:  2022-01-17

2.  CNNG: A Convolutional Neural Networks With Gated Recurrent Units for Autism Spectrum Disorder Classification.

Authors:  Wenjing Jiang; Shuaiqi Liu; Hong Zhang; Xiuming Sun; Shui-Hua Wang; Jie Zhao; Jingwen Yan
Journal:  Front Aging Neurosci       Date:  2022-07-05       Impact factor: 5.702

3.  Gradients of connectivity as graph Fourier bases of brain activity.

Authors:  Giulia Lioi; Vincent Gripon; Abdelbasset Brahim; François Rousseau; Nicolas Farrugia
Journal:  Netw Neurosci       Date:  2021-04-27

Review 4.  Brain imaging-based machine learning in autism spectrum disorder: methods and applications.

Authors:  Ming Xu; Vince Calhoun; Rongtao Jiang; Weizheng Yan; Jing Sui
Journal:  J Neurosci Methods       Date:  2021-06-24       Impact factor: 2.390

  4 in total

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