Literature DB >> 32591910

Rahnella aceris sp. nov., isolated from sap drawn from Acer pictum.

Soon Dong Lee1, Dabin Jeon2, In Seop Kim3, Hanna Choe4, Ji-Sun Kim4.   

Abstract

A Gram-reaction-negative, facultatively anaerobic bacterium, designated SAP-19T, was isolated from sap extracted from Acer pictum in Mt. Halla in Jeju, Republic of Korea and its taxonomic statue was investigated by a polyphasic approach including genome- and 16S rRNA gene-based phylogenetic analyses. Cells were motile, short rods and showed growth at 20-30 °C, pH 4-9 and 0-6% (w/v) NaCl. The whole genome- and 16S rRNA gene-based phylogenetic analyses exhibited that strain SAP-19T belongs to the genus Rahnella and forms a tight cluster with Rahnella aquatilis. The isolate shared average nucleotide identity of 92.7% and 16S rRNA gene sequence similarity of 99.6% with the type strain of Rahnella aquatilis. The polar lipids contained phosphatidylethanolamine, an unidentified aminophospholipid and an unidentified lipid. The major isoprenoid quinone was Q-8. The predominant fatty acids were C16:0 and C17:0cyclo. The G + C content of the genome was 52.3%. The low average nucleotide identity (92.7%) and digital DNA relatedness (48.6%) values between the isolate and the most closely related strain showed that the isolate can be considered a different genospecies. On the basis of combined data obtained in this study, strain SAP-19T (= KACC 21744T = NBRC 114407T) represents a novel species of the genus Rahnella, for which the name Rahnella aceris sp. nov. is proposed.

Entities:  

Keywords:  Acer pictum; Rahnella aceris; Tree sap; Yersiniaceae

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Substances:

Year:  2020        PMID: 32591910     DOI: 10.1007/s00203-020-01961-5

Source DB:  PubMed          Journal:  Arch Microbiol        ISSN: 0302-8933            Impact factor:   2.552


  3 in total

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Authors:  Rosa María Pineda-Mendoza; Gerardo Zúñiga; María Fernanda López; María Eugenia Hidalgo-Lara; Alejandro Santiago-Hernández; Azucena López-López; Flor N Rivera Orduña; Claudia Cano-Ramírez
Journal:  Front Microbiol       Date:  2022-05-31       Impact factor: 6.064

2.  N-acyl-homoserine lactone produced by Rahnella inusitata isolated from the gut of Galleria mellonella influences Salmonella phenotypes.

Authors:  Leonardo Luiz de Freitas; Deisy Guimarães Carneiro; Gabriel Silva Oliveira; Maria Cristina Dantas Vanetti
Journal:  Braz J Microbiol       Date:  2022-01-20       Impact factor: 2.214

3.  Comparative Genomics Assisted Functional Characterization of Rahnella aceris ZF458 as a Novel Plant Growth Promoting Rhizobacterium.

Authors:  Shuai Xu; Yurong Zhao; Yue Peng; Yanxia Shi; Xuewen Xie; Ali Chai; Baoju Li; Lei Li
Journal:  Front Microbiol       Date:  2022-04-04       Impact factor: 6.064

  3 in total

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