Literature DB >> 32588759

In silico screening of glycogen synthase kinase-3β targeted ligands against acetylcholinesterase and its probable relevance to Alzheimer's disease.

Nasimudeen R Jabir1, Shazi Shakil2,3,4, Shams Tabrez2,3, Mohd Shahnawaz Khan5, Md Tabish Rehman6, Bakrudeen Ali Ahmed1.   

Abstract

Alzheimer's disease (AD) is a growing global health concern that affects 10% of the population aged above 65 years. A growing body of evidence indicates that multi-targeted drugs might be useful therapeutic options owing to the heterogeneity of AD pathology. The current study exploited advanced computational biology tools to identify ligands that might display effective binding to two protein targets in the context of AD. The present study used in silico virtual screening of small molecules library to identify effectiveness against two AD targets viz. acetyl cholinesterase (AChE) and glycogen synthase kinase-3β (GSK-3β). PyRX-Python prescription with AutodockVina was used to generate binding energy profiles. Further screening was accomplished using SwissADME and molecular interaction studies. The present study obtained 48 ligands (absolute binding energy >8 kcal/mol), by virtual screening of 100 ligands. Among those, 13 ligands (BRW, 6VK, 6Z5, SMH, X37, 55E, 65 A, IQ6, 6VL, 6VM, F1B, 6Z2 and GVP) were selected based on blood brain barrier (BBB) permeability, acceptable ADME properties as well as their molecular interaction profiles with the aforementioned AD-targets. The present study has predicted certain molecules that appear worthy to be tested for effectiveness against two AD targets, namely AChE and GSK-3β. However, the results warrant further wet laboratory validation, as computational studies are merely predictive in nature. This approach might be useful for future treatment of AD.Communicated by Ramaswamy H. Sarma.

Entities:  

Keywords:  Acetyl cholinesterase; Alzheimer’s disease; drug discovery; glycogen synthase kinase-3β; in silico screening

Year:  2020        PMID: 32588759     DOI: 10.1080/07391102.2020.1784796

Source DB:  PubMed          Journal:  J Biomol Struct Dyn        ISSN: 0739-1102


  8 in total

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Authors:  Iohanan Daniel García Marín; Raúl Horacio Camarillo López; Oscar Aurelio Martínez; Itzia Irene Padilla-Martínez; José Correa-Basurto; Martha Cecilia Rosales-Hernández
Journal:  PLoS One       Date:  2022-06-03       Impact factor: 3.752

2.  Exploring the Binding Pattern of Geraniol with Acetylcholinesterase through In Silico Docking, Molecular Dynamics Simulation, and In Vitro Enzyme Inhibition Kinetics Studies.

Authors:  Danish Iqbal; M Salman Khan; Mohd Waiz; Md Tabish Rehman; Mohammed Alaidarous; Azfar Jamal; Abdulaziz S Alothaim; Mohamed F AlAjmi; Bader Mohammed Alshehri; Saeed Banawas; Mohammed Alsaweed; Yahya Madkhali; Abdulrahman Algarni; Suliman A Alsagaby; Wael Alturaiki
Journal:  Cells       Date:  2021-12-14       Impact factor: 6.600

3.  Dieckol and Its Derivatives as Potential Inhibitors of SARS-CoV-2 Spike Protein (UK Strain: VUI 202012/01): A Computational Study.

Authors:  Mohammad Aatif; Ghazala Muteeb; Abdulrahman Alsultan; Adil Alshoaibi; Bachir Yahia Khelif
Journal:  Mar Drugs       Date:  2021-04-25       Impact factor: 5.118

4.  Epigallocatechin-3-Gallate Provides Protection Against Alzheimer's Disease-Induced Learning and Memory Impairments in Rats.

Authors:  Shanji Nan; Peng Wang; Yizhi Zhang; Jia Fan
Journal:  Drug Des Devel Ther       Date:  2021-05-13       Impact factor: 4.162

5.  Concatenation of molecular docking and molecular simulation of BACE-1, γ-secretase targeted ligands: in pursuit of Alzheimer's treatment.

Authors:  Nasimudeen R Jabir; Md Tabish Rehman; Khadeejah Alsolami; Shazi Shakil; Torki A Zughaibi; Raed F Alserihi; Mohd Shahnawaz Khan; Mohamed F AlAjmi; Shams Tabrez
Journal:  Ann Med       Date:  2021-12       Impact factor: 4.709

6.  Elucidating Antiangiogenic Potential of Rauwolfia serpentina: VEGFR-2 Targeting-Based Molecular Docking Study.

Authors:  Adel M Abuzenadah; Fatin Al-Sayes; Syed Sahajada Mahafujul Alam; Mehboob Hoque; Sajjad Karim; Ibtessam M R Hussain; Shams Tabrez
Journal:  Evid Based Complement Alternat Med       Date:  2022-02-14       Impact factor: 2.629

7.  Identification of Potential Poly (ADP-Ribose) Polymerase-1 Inhibitors Derived from Rauwolfia serpentina: Possible Implication in Cancer Therapy.

Authors:  Adel M Abuzenadah; Fatin Al-Sayes; Syed Sahajada Mahafujul Alam; Mehboob Hoque; Sajjad Karim; Ibtessam M R Hussain; Shams Tabrez
Journal:  Evid Based Complement Alternat Med       Date:  2022-03-23       Impact factor: 2.629

8.  Identification of a Potential Inhibitor (MCULE-8777613195-0-12) of New Delhi Metallo-β-Lactamase-1 (NDM-1) Using In Silico and In Vitro Approaches.

Authors:  Ghazala Muteeb; Md Tabish Rehman; Mohamed F AlAjmi; Mohammad Aatif; Mohd Farhan; Sheeba Shafi
Journal:  Molecules       Date:  2022-09-13       Impact factor: 4.927

  8 in total

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