Literature DB >> 32578012

Evaluation of Viral Recovery Methodologies from Solid Waste Landfill Leachate.

Natália Maria Lanzarini1,2, Rafaela Marinho Mata3,4, Enrico Mendes Saggioro4, Josino Costa Moreira5, Camille Ferreira Mannarino4, Marize Pereira Miagostovich3.   

Abstract

Leachate from solid waste landfill is a dark liquid of variable composition and possible source of contamination of groundwater and surface waters. This study aims to assess skimmed milk flocculation and ultracentrifugation as viral concentration methods associated to different nucleic acid extraction protocols in order to establish a methodology for virus recovery from sanitary landfill leachate. Spiking experiments using human adenovirus (HAdV) and bacteriophage PP7 revealed the association of QIAamp Fast DNA Stool mini kit® nucleic acid extraction and ultracentrifugation as an effective method for recovering HAdV (346.18%) and PP7 (523.97%) when compared to organic flocculation method (162.64% for HAdV and 0.61% for PP7) that presented PCR inhibition in all undiluted samples. Ultracentrifugation applied in three landfill samples confirm efficiency of the methodology detecting HAdV in all samples with a mean of 3.44E + 06 ± 1.56E + 06 genomic copies/mL. Nucleotide sequencing characterized HAdV as belonging to group B and F. JC polyomavirus (JCPyV) was also investigated in those samples; however, detection was not observed. Methodologies for detection of viruses in leachate can be useful to generate data for future health risk analysis of workers who have contact with solid urban waste, as well as populations exposed to different environmental matrices contaminated by these effluents.

Entities:  

Keywords:  HAdV; JCPyV; Leachate; Methodologies; Solid waste

Mesh:

Substances:

Year:  2020        PMID: 32578012     DOI: 10.1007/s12560-020-09431-3

Source DB:  PubMed          Journal:  Food Environ Virol        ISSN: 1867-0334            Impact factor:   2.778


  32 in total

1.  Rapid typing of human adenoviruses by a general PCR combined with restriction endonuclease analysis.

Authors:  A Allard; B Albinsson; G Wadell
Journal:  J Clin Microbiol       Date:  2001-02       Impact factor: 5.948

2.  Rapid and simple method for purification of nucleic acids.

Authors:  R Boom; C J Sol; M M Salimans; C L Jansen; P M Wertheim-van Dillen; J van der Noordaa
Journal:  J Clin Microbiol       Date:  1990-03       Impact factor: 5.948

3.  Development and application of a one-step low cost procedure to concentrate viruses from seawater samples.

Authors:  B Calgua; A Mengewein; A Grunert; S Bofill-Mas; P Clemente-Casares; A Hundesa; A P Wyn-Jones; J M López-Pila; R Girones
Journal:  J Virol Methods       Date:  2008-09-19       Impact factor: 2.014

4.  Viral Aggregation: Impact on Virus Behavior in the Environment.

Authors:  Charles P Gerba; Walter Q Betancourt
Journal:  Environ Sci Technol       Date:  2017-06-21       Impact factor: 9.028

Review 5.  Landfill leachate treatment in Brazil - An overview.

Authors:  Alyne Moraes Costa; Raquel Greice de Souza Marotta Alfaia; Juacyara Carbonelli Campos
Journal:  J Environ Manage       Date:  2018-11-21       Impact factor: 6.789

6.  New methods for the concentration of viruses from urban sewage using quantitative PCR.

Authors:  Byron Calgua; Jesus Rodriguez-Manzano; Ayalkibet Hundesa; Esther Suñen; Miquel Calvo; Sílvia Bofill-Mas; Rosina Girones
Journal:  J Virol Methods       Date:  2012-11-16       Impact factor: 2.014

7.  Detection and quantification of classic and emerging viruses by skimmed-milk flocculation and PCR in river water from two geographical areas.

Authors:  Byron Calgua; Tulio Fumian; Marta Rusiñol; Jesus Rodriguez-Manzano; Viviana A Mbayed; Silvia Bofill-Mas; Marize Miagostovich; Rosina Girones
Journal:  Water Res       Date:  2013-03-13       Impact factor: 11.236

8.  Virus occupational exposure in solid waste processing facilities.

Authors:  Annalaura Carducci; Ileana Federigi; Marco Verani
Journal:  Ann Occup Hyg       Date:  2013-08-05

9.  Metagenomics for the study of viruses in urban sewage as a tool for public health surveillance.

Authors:  X Fernandez-Cassi; N Timoneda; S Martínez-Puchol; M Rusiñol; J Rodriguez-Manzano; N Figuerola; S Bofill-Mas; J F Abril; R Girones
Journal:  Sci Total Environ       Date:  2017-11-04       Impact factor: 7.963

10.  Quantification of human and animal viruses to differentiate the origin of the fecal contamination present in environmental samples.

Authors:  Sílvia Bofill-Mas; Marta Rusiñol; Xavier Fernandez-Cassi; Anna Carratalà; Ayalkibet Hundesa; Rosina Girones
Journal:  Biomed Res Int       Date:  2013-05-15       Impact factor: 3.411

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