Literature DB >> 32575237

Analytical results for non-Markovian models of bursty gene expression.

Zihao Wang1, Zhenquan Zhang1, Tianshou Zhou1.   

Abstract

Modeling stochastic gene expression has long relied on Markovian hypothesis. In recent years, however, this hypothesis is challenged by the increasing availability of time-resolved data. Correspondingly, there is considerable interest in understanding how non-Markovian reaction kinetics of gene expression impact protein variations across a population of genetically identical cells. Here, we analyze a stochastic model of gene expression with arbitrary waiting-time distributions, which includes existing gene models as its special cases. We find that stationary probabilistic behavior of this non-Markovian system is exactly the same as that of an equivalent Markovian system with the same substrates. Based on this fact, we derive analytical results, which provide insight into the roles of feedback regulation and molecular memory in controlling the protein noise and properties of the steady states, which are inaccessible via existing methodology. Our results also provide quantitative insight into diverse cellular processes involving stochastic sources of gene expression and molecular memory.

Mesh:

Year:  2020        PMID: 32575237     DOI: 10.1103/PhysRevE.101.052406

Source DB:  PubMed          Journal:  Phys Rev E        ISSN: 2470-0045            Impact factor:   2.529


  1 in total

1.  Neural network aided approximation and parameter inference of non-Markovian models of gene expression.

Authors:  Qingchao Jiang; Xiaoming Fu; Shifu Yan; Runlai Li; Wenli Du; Zhixing Cao; Feng Qian; Ramon Grima
Journal:  Nat Commun       Date:  2021-05-11       Impact factor: 14.919

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.